Baker CJO - Search Results

1

Perspectives on automated composition of workflows in the life sciences.

Lamprecht AL, Palmblad M, Ison J, Schwämmle V, Al Manir MS, Altintas I, Baker CJO, Ben Hadj Amor A, Capella-Gutierrez S, Charonyktakis P, Crusoe MR, Gil Y, Goble C, Griffin TJ, Groth P, Ienasescu H, Jagtap P, Kalaš M, Kasalica V, Khanteymoori A, Kuhn T, Mei H, Ménager H, Möller S, Richardson RA, Robert V, Soiland-Reyes S, Stevens R, Szaniszlo S, Verberne S, Verhoeven A, Wolstencroft K. Lamprecht AL, et al. Among authors: baker cjo. F1000Res. 2021 Sep 7;10:897. doi: 10.12688/f1000research.54159.1. eCollection 2021. F1000Res. 2021. PMID: 34804501 Free PMC article.

2

A Surveillance Infrastructure for Malaria Analytics: Provisioning Data Access and Preservation of Interoperability.

Al Manir MS, Brenas JH, Baker CJ, Shaban-Nejad A. Al Manir MS, et al. JMIR Public Health Surveill. 2018 Jun 15;4(2):e10218. doi: 10.2196/10218. JMIR Public Health Surveill. 2018. PMID: 29907554 Free PMC article.

3

Semantic Web of Things (SWoT) for Global Infectious Disease Control and Prevention.

Shaban-Nejad A, Brenas JH, Al Manir MS, Zinszer K, Baker CJO. Shaban-Nejad A, et al. Among authors: baker cjo. Stud Health Technol Inform. 2020 Jun 26;272:425-428. doi: 10.3233/SHTI200586. Stud Health Technol Inform. 2020. PMID: 32604693

4

Exploring Semantic Data Federation to Enable Malaria Surveillance Queries.

Brenas JH, Al Manir MS, Zinszer K, Baker CJO, Shaban-Nejad A. Brenas JH, et al. Among authors: baker cjo. Stud Health Technol Inform. 2018;247:6-10. Stud Health Technol Inform. 2018. PMID: 29677912

5

Deploying mutation impact text-mining software with the SADI Semantic Web Services framework.

Riazanov A, Laurila JB, Baker CJ. Riazanov A, et al. BMC Bioinformatics. 2011;12 Suppl 4(Suppl 4):S6. doi: 10.1186/1471-2105-12-S4-S6. Epub 2011 Jul 5. BMC Bioinformatics. 2011. PMID: 21992079 Free PMC article.

6

Between proteins and phenotypes: annotation and interpretation of mutations.

Baker CJ, Rebholz-Schuhmann D. Baker CJ, et al. BMC Bioinformatics. 2009 Aug 27;10 Suppl 8(Suppl 8):I1. doi: 10.1186/1471-2105-10-S8-I1. BMC Bioinformatics. 2009. PMID: 19758463 Free PMC article. No abstract available.

7

Algorithms and semantic infrastructure for mutation impact extraction and grounding.

Laurila JB, Naderi N, Witte R, Riazanov A, Kouznetsov A, Baker CJ. Laurila JB, et al. BMC Genomics. 2010 Dec 2;11 Suppl 4(Suppl 4):S24. doi: 10.1186/1471-2164-11-S4-S24. BMC Genomics. 2010. PMID: 21143808 Free PMC article.

8

Occupation Coding of Job Titles: Iterative Development of an Automated Coding Algorithm for the Canadian National Occupation Classification (ACA-NOC).

Bao H, Baker CJO, Adisesh A. Bao H, et al. Among authors: baker cjo. JMIR Form Res. 2020 Aug 5;4(8):e16422. doi: 10.2196/16422. JMIR Form Res. 2020. PMID: 32755893 Free PMC article.

9

Benchmarking infrastructure for mutation text mining.

Klein A, Riazanov A, Hindle MM, Baker CJ. Klein A, et al. J Biomed Semantics. 2014 Feb 25;5(1):11. doi: 10.1186/2041-1480-5-11. J Biomed Semantics. 2014. PMID: 24568600 Free PMC article.

10

From Cues to Nudge: A Knowledge-Based Framework for Surveillance of Healthcare-Associated Infections.

Shaban-Nejad A, Mamiya H, Riazanov A, Forster AJ, Baker CJ, Tamblyn R, Buckeridge DL. Shaban-Nejad A, et al. J Med Syst. 2016 Jan;40(1):23. doi: 10.1007/s10916-015-0364-6. Epub 2015 Nov 4. J Med Syst. 2016. PMID: 26537131

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