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The Data Use Ontology to streamline responsible access to human biomedical datasets.
Lawson J, Cabili MN, Kerry G, Boughtwood T, Thorogood A, Alper P, Bowers SR, Boyles RR, Brookes AJ, Brush M, Burdett T, Clissold H, Donnelly S, Dyke SOM, Freeberg MA, Haendel MA, Hata C, Holub P, Jeanson F, Jene A, Kawashima M, Kawashima S, Konopko M, Kyomugisha I, Li H, Linden M, Rodriguez LL, Morita M, Mulder N, Muller J, Nagaie S, Nasir J, Ogishima S, Ota Wang V, Paglione LD, Pandya RN, Parkinson H, Philippakis AA, Prasser F, Rambla J, Reinold K, Rushton GA, Saltzman A, Saunders G, Sofia HJ, Spalding JD, Swertz MA, Tulchinsky I, van Enckevort EJ, Varma S, Voisin C, Yamamoto N, Yamasaki C, Zass L, Guidry Auvil JM, Nyrönen TH, Courtot M. Lawson J, et al. Among authors: prasser f. Cell Genom. 2021 Nov 10;1(2):None. doi: 10.1016/j.xgen.2021.100028. Cell Genom. 2021. PMID: 34820659 Free PMC article.
Statistical biases due to anonymization evaluated in an open clinical dataset from COVID-19 patients.
Koll CEM, Hopff SM, Meurers T, Lee CH, Kohls M, Stellbrink C, Thibeault C, Reinke L, Steinbrecher S, Schreiber S, Mitrov L, Frank S, Miljukov O, Erber J, Hellmuth JC, Reese JP, Steinbeis F, Bahmer T, Hagen M, Meybohm P, Hansch S, Vadász I, Krist L, Jiru-Hillmann S, Prasser F, Vehreschild JJ; NAPKON Study Group. Koll CEM, et al. Among authors: prasser f. Sci Data. 2022 Dec 21;9(1):776. doi: 10.1038/s41597-022-01669-9. Sci Data. 2022. PMID: 36543828 Free PMC article.
Privacy risks of whole-slide image sharing in digital pathology.
Holub P, Müller H, Bíl T, Pireddu L, Plass M, Prasser F, Schlünder I, Zatloukal K, Nenutil R, Brázdil T. Holub P, et al. Among authors: prasser f. Nat Commun. 2023 May 4;14(1):2577. doi: 10.1038/s41467-023-37991-y. Nat Commun. 2023. PMID: 37142591 Free PMC article.
Data Provenance in Biomedical Research: Scoping Review.
Johns M, Meurers T, Wirth FN, Haber AC, Müller A, Halilovic M, Balzer F, Prasser F. Johns M, et al. Among authors: prasser f. J Med Internet Res. 2023 Mar 27;25:e42289. doi: 10.2196/42289. J Med Internet Res. 2023. PMID: 36972116 Free PMC article. Review.
SCOR: A secure international informatics infrastructure to investigate COVID-19.
Raisaro JL, Marino F, Troncoso-Pastoriza J, Beau-Lejdstrom R, Bellazzi R, Murphy R, Bernstam EV, Wang H, Bucalo M, Chen Y, Gottlieb A, Harmanci A, Kim M, Kim Y, Klann J, Klersy C, Malin BA, Méan M, Prasser F, Scudeller L, Torkamani A, Vaucher J, Puppala M, Wong STC, Frenkel-Morgenstern M, Xu H, Musa BM, Habib AG, Cohen T, Wilcox A, Salihu HM, Sofia H, Jiang X, Hubaux JP. Raisaro JL, et al. Among authors: prasser f. J Am Med Inform Assoc. 2020 Nov 1;27(11):1721-1726. doi: 10.1093/jamia/ocaa172. J Am Med Inform Assoc. 2020. PMID: 32918447 Free PMC article.
Data integration and analysis for circadian medicine.
Baum L, Johns M, Poikela M, Möller R, Ananthasubramaniam B, Prasser F. Baum L, et al. Among authors: prasser f. Acta Physiol (Oxf). 2023 Apr;237(4):e13951. doi: 10.1111/apha.13951. Epub 2023 Feb 28. Acta Physiol (Oxf). 2023. PMID: 36790321 Review.
Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health.
Holub P, Kohlmayer F, Prasser F, Mayrhofer MT, Schlünder I, Martin GM, Casati S, Koumakis L, Wutte A, Kozera Ł, Strapagiel D, Anton G, Zanetti G, Sezerman OU, Mendy M, Valík D, Lavitrano M, Dagher G, Zatloukal K, van Ommen GB, Litton JE. Holub P, et al. Among authors: prasser f. Biopreserv Biobank. 2018 Apr;16(2):97-105. doi: 10.1089/bio.2017.0110. Epub 2018 Jan 23. Biopreserv Biobank. 2018. PMID: 29359962 Free PMC article. Review.
63 results