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GranatumX: A Community-engaging, Modularized, and Flexible Webtool for Single-cell Data Analysis.
Garmire DG, Zhu X, Mantravadi A, Huang Q, Yunits B, Liu Y, Wolfgruber T, Poirion O, Zhao T, Arisdakessian C, Stanojevic S, Garmire LX. Garmire DG, et al. Among authors: liu y. Genomics Proteomics Bioinformatics. 2021 Jun;19(3):452-460. doi: 10.1016/j.gpb.2021.07.005. Epub 2021 Dec 30. Genomics Proteomics Bioinformatics. 2021. PMID: 34973417 Free PMC article.
Single cell transcriptome research in human placenta.
Li H, Huang Q, Liu Y, Garmire LX. Li H, et al. Among authors: liu y. Reproduction. 2020 Dec;160(6):R155-R167. doi: 10.1530/REP-20-0231. Reproduction. 2020. PMID: 33112783 Free PMC article. Review.
Maternal plasma lipids are involved in the pathogenesis of preterm birth.
Chen Y, He B, Liu Y, Aung MT, Rosario-Pabón Z, Vélez-Vega CM, Alshawabkeh A, Cordero JF, Meeker JD, Garmire LX. Chen Y, et al. Among authors: liu y. Gigascience. 2022 Feb 15;11:giac004. doi: 10.1093/gigascience/giac004. Gigascience. 2022. PMID: 35166340 Free PMC article.
Inferring causal molecular networks: empirical assessment through a community-based effort.
Hill SM, Heiser LM, Cokelaer T, Unger M, Nesser NK, Carlin DE, Zhang Y, Sokolov A, Paull EO, Wong CK, Graim K, Bivol A, Wang H, Zhu F, Afsari B, Danilova LV, Favorov AV, Lee WS, Taylor D, Hu CW, Long BL, Noren DP, Bisberg AJ; HPN-DREAM Consortium; Mills GB, Gray JW, Kellen M, Norman T, Friend S, Qutub AA, Fertig EJ, Guan Y, Song M, Stuart JM, Spellman PT, Koeppl H, Stolovitzky G, Saez-Rodriguez J, Mukherjee S. Hill SM, et al. Nat Methods. 2016 Apr;13(4):310-8. doi: 10.1038/nmeth.3773. Epub 2016 Feb 22. Nat Methods. 2016. PMID: 26901648 Free PMC article.
Dravet syndrome patient-derived neurons suggest a novel epilepsy mechanism.
Liu Y, Lopez-Santiago LF, Yuan Y, Jones JM, Zhang H, O'Malley HA, Patino GA, O'Brien JE, Rusconi R, Gupta A, Thompson RC, Natowicz MR, Meisler MH, Isom LL, Parent JM. Liu Y, et al. Ann Neurol. 2013 Jul;74(1):128-39. doi: 10.1002/ana.23897. Epub 2013 Jul 2. Ann Neurol. 2013. PMID: 23821540 Free PMC article.
A native function for RAN translation and CGG repeats in regulating fragile X protein synthesis.
Rodriguez CM, Wright SE, Kearse MG, Haenfler JM, Flores BN, Liu Y, Ifrim MF, Glineburg MR, Krans A, Jafar-Nejad P, Sutton MA, Bassell GJ, Parent JM, Rigo F, Barmada SJ, Todd PK. Rodriguez CM, et al. Among authors: liu y. Nat Neurosci. 2020 Mar;23(3):386-397. doi: 10.1038/s41593-020-0590-1. Epub 2020 Feb 17. Nat Neurosci. 2020. PMID: 32066985 Free PMC article.
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