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Age-Specific Adult Rat Brain MRI Templates and Tissue Probability Maps.
MacNicol E, Wright P, Kim E, Brusini I, Esteban O, Simmons C, Turkheimer FE, Cash D. MacNicol E, et al. Among authors: esteban o. Front Neuroinform. 2022 Jan 7;15:669049. doi: 10.3389/fninf.2021.669049. eCollection 2021. Front Neuroinform. 2022. PMID: 35069163 Free PMC article.
TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models.
Ciric R, Thompson WH, Lorenz R, Goncalves M, MacNicol EE, Markiewicz CJ, Halchenko YO, Ghosh SS, Gorgolewski KJ, Poldrack RA, Esteban O. Ciric R, et al. Among authors: esteban o. Nat Methods. 2022 Dec;19(12):1568-1571. doi: 10.1038/s41592-022-01681-2. Epub 2022 Dec 1. Nat Methods. 2022. PMID: 36456786 Free PMC article.
A consensus protocol for functional connectivity analysis in the rat brain.
Grandjean J, Desrosiers-Gregoire G, Anckaerts C, Angeles-Valdez D, Ayad F, Barrière DA, Blockx I, Bortel A, Broadwater M, Cardoso BM, Célestine M, Chavez-Negrete JE, Choi S, Christiaen E, Clavijo P, Colon-Perez L, Cramer S, Daniele T, Dempsey E, Diao Y, Doelemeyer A, Dopfel D, Dvořáková L, Falfán-Melgoza C, Fernandes FF, Fowler CF, Fuentes-Ibañez A, Garin CM, Gelderman E, Golden CEM, Guo CCG, Henckens MJAG, Hennessy LA, Herman P, Hofwijks N, Horien C, Ionescu TM, Jones J, Kaesser J, Kim E, Lambers H, Lazari A, Lee SH, Lillywhite A, Liu Y, Liu YY, López-Castro A, López-Gil X, Ma Z, MacNicol E, Madularu D, Mandino F, Marciano S, McAuslan MJ, McCunn P, McIntosh A, Meng X, Meyer-Baese L, Missault S, Moro F, Naessens DMP, Nava-Gomez LJ, Nonaka H, Ortiz JJ, Paasonen J, Peeters LM, Pereira M, Perez PD, Pompilus M, Prior M, Rakhmatullin R, Reimann HM, Reinwald J, Del Rio RT, Rivera-Olvera A, Ruiz-Pérez D, Russo G, Rutten TJ, Ryoke R, Sack M, Salvan P, Sanganahalli BG, Schroeter A, Seewoo BJ, Selingue E, Seuwen A, Shi B, Sirmpilatze N, Smith JAB, Smith C, Sobczak F, Stenroos PJ, Straathof M, Strobelt S, Sumiyoshi A, Takahashi K, Torres-García ME, Tudela R, van den Berg M, van der Marel K, … See abstract for full author list ➔ Grandjean J, et al. Among authors: esteban o. Nat Neurosci. 2023 Apr;26(4):673-681. doi: 10.1038/s41593-023-01286-8. Epub 2023 Mar 27. Nat Neurosci. 2023. PMID: 36973511 Free PMC article.
Author Correction: A consensus protocol for functional connectivity analysis in the rat brain.
Grandjean J, Desrosiers-Gregoire G, Anckaerts C, Angeles-Valdez D, Ayad F, Barrière DA, Blockx I, Bortel A, Broadwater M, Cardoso BM, Célestine M, Chavez-Negrete JE, Choi S, Christiaen E, Clavijo P, Colon-Perez L, Cramer S, Daniele T, Dempsey E, Diao Y, Doelemeyer A, Dopfel D, Dvořáková L, Falfán-Melgoza C, Fernandes FF, Fowler CF, Fuentes-Ibañez A, Garin CM, Gelderman E, Golden CEM, Guo CCG, Henckens MJAG, Hennessy LA, Herman P, Hofwijks N, Horien C, Ionescu TM, Jones J, Kaesser J, Kim E, Lambers H, Lazari A, Lee SH, Lillywhite A, Liu Y, Liu YY, López-Castro A, López-Gil X, Ma Z, MacNicol E, Madularu D, Mandino F, Marciano S, McAuslan MJ, McCunn P, McIntosh A, Meng X, Meyer-Baese L, Missault S, Moro F, Naessens DMP, Nava-Gomez LJ, Nonaka H, Ortiz JJ, Paasonen J, Peeters LM, Pereira M, Perez PD, Pompilus M, Prior M, Rakhmatullin R, Reimann HM, Reinwald J, Del Rio RT, Rivera-Olvera A, Ruiz-Pérez D, Russo G, Rutten TJ, Ryoke R, Sack M, Salvan P, Sanganahalli BG, Schroeter A, Seewoo BJ, Selingue E, Seuwen A, Shi B, Sirmpilatze N, Smith JAB, Smith C, Sobczak F, Stenroos PJ, Straathof M, Strobelt S, Sumiyoshi A, Takahashi K, Torres-García ME, Tudela R, van den Berg M, van der Marel K, … See abstract for full author list ➔ Grandjean J, et al. Among authors: esteban o. Nat Neurosci. 2023 Jun;26(6):1127-1128. doi: 10.1038/s41593-023-01328-1. Nat Neurosci. 2023. PMID: 37072562 No abstract available.
Quality control in functional MRI studies with MRIQC and fMRIPrep.
Provins C, MacNicol E, Seeley SH, Hagmann P, Esteban O. Provins C, et al. Among authors: esteban o. Front Neuroimaging. 2023 Jan 12;1:1073734. doi: 10.3389/fnimg.2022.1073734. eCollection 2022. Front Neuroimaging. 2023. PMID: 37555175 Free PMC article.
ASLPrep: a platform for processing of arterial spin labeled MRI and quantification of regional brain perfusion.
Adebimpe A, Bertolero M, Dolui S, Cieslak M, Murtha K, Baller EB, Boeve B, Boxer A, Butler ER, Cook P, Colcombe S, Covitz S, Davatzikos C, Davila DG, Elliott MA, Flounders MW, Franco AR, Gur RE, Gur RC, Jaber B, McMillian C; ALLFTD Consortium; Milham M, Mutsaerts HJMM, Oathes DJ, Olm CA, Phillips JS, Tackett W, Roalf DR, Rosen H, Tapera TM, Tisdall MD, Zhou D, Esteban O, Poldrack RA, Detre JA, Satterthwaite TD. Adebimpe A, et al. Among authors: esteban o. Nat Methods. 2022 Jun;19(6):683-686. doi: 10.1038/s41592-022-01458-7. Epub 2022 Jun 10. Nat Methods. 2022. PMID: 35689029 Free PMC article.
MBIS: multivariate Bayesian image segmentation tool.
Esteban O, Wollny G, Gorthi S, Ledesma-Carbayo MJ, Thiran JP, Santos A, Bach-Cuadra M. Esteban O, et al. Comput Methods Programs Biomed. 2014 Jul;115(2):76-94. doi: 10.1016/j.cmpb.2014.03.003. Epub 2014 Apr 3. Comput Methods Programs Biomed. 2014. PMID: 24768617
74 results