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Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity.
Mills RH, Dulai PS, Vázquez-Baeza Y, Sauceda C, Daniel N, Gerner RR, Batachari LE, Malfavon M, Zhu Q, Weldon K, Humphrey G, Carrillo-Terrazas M, Goldasich LD, Bryant M, Raffatellu M, Quinn RA, Gewirtz AT, Chassaing B, Chu H, Sandborn WJ, Dorrestein PC, Knight R, Gonzalez DJ. Mills RH, et al. Nat Microbiol. 2022 Feb;7(2):262-276. doi: 10.1038/s41564-021-01050-3. Epub 2022 Jan 27. Nat Microbiol. 2022. PMID: 35087228 Free PMC article.
Meta-analyses of studies of the human microbiota.
Lozupone CA, Stombaugh J, Gonzalez A, Ackermann G, Wendel D, Vázquez-Baeza Y, Jansson JK, Gordon JI, Knight R. Lozupone CA, et al. Genome Res. 2013 Oct;23(10):1704-14. doi: 10.1101/gr.151803.112. Epub 2013 Jul 16. Genome Res. 2013. PMID: 23861384 Free PMC article.
The treatment-naive microbiome in new-onset Crohn's disease.
Gevers D, Kugathasan S, Denson LA, Vázquez-Baeza Y, Van Treuren W, Ren B, Schwager E, Knights D, Song SJ, Yassour M, Morgan XC, Kostic AD, Luo C, González A, McDonald D, Haberman Y, Walters T, Baker S, Rosh J, Stephens M, Heyman M, Markowitz J, Baldassano R, Griffiths A, Sylvester F, Mack D, Kim S, Crandall W, Hyams J, Huttenhower C, Knight R, Xavier RJ. Gevers D, et al. Cell Host Microbe. 2014 Mar 12;15(3):382-392. doi: 10.1016/j.chom.2014.02.005. Cell Host Microbe. 2014. PMID: 24629344 Free PMC article.
SnapShot: the human microbiome.
González A, Vázquez-Baeza Y, Knight R. González A, et al. Cell. 2014 Jul 31;158(3):690-690.e1. doi: 10.1016/j.cell.2014.07.019. Cell. 2014. PMID: 25083877 Free article. No abstract available.
From Sample to Multi-Omics Conclusions in under 48 Hours.
Quinn RA, Navas-Molina JA, Hyde ER, Song SJ, Vázquez-Baeza Y, Humphrey G, Gaffney J, Minich JJ, Melnik AV, Herschend J, DeReus J, Durant A, Dutton RJ, Khosroheidari M, Green C, da Silva R, Dorrestein PC, Knight R. Quinn RA, et al. mSystems. 2016 Apr 26;1(2):e00038-16. doi: 10.1128/mSystems.00038-16. eCollection 2016 Mar-Apr. mSystems. 2016. PMID: 27822524 Free PMC article.
Bringing the Dynamic Microbiome to Life with Animations.
Vázquez-Baeza Y, Gonzalez A, Smarr L, McDonald D, Morton JT, Navas-Molina JA, Knight R. Vázquez-Baeza Y, et al. Cell Host Microbe. 2017 Jan 11;21(1):7-10. doi: 10.1016/j.chom.2016.12.009. Cell Host Microbe. 2017. PMID: 28081445 Free article.
Balance Trees Reveal Microbial Niche Differentiation.
Morton JT, Sanders J, Quinn RA, McDonald D, Gonzalez A, Vázquez-Baeza Y, Navas-Molina JA, Song SJ, Metcalf JL, Hyde ER, Lladser M, Dorrestein PC, Knight R. Morton JT, et al. mSystems. 2017 Jan 17;2(1):e00162-16. doi: 10.1128/mSystems.00162-16. eCollection 2017 Jan-Feb. mSystems. 2017. PMID: 28144630 Free PMC article.
74 results