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Publisher Correction: Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves.
Lindsey BB, Villabona-Arenas CJ, Campbell F, Keeley AJ, Parker MD, Shah DR, Parsons H, Zhang P, Kakkar N, Gallis M, Foulkes BH, Wolverson P, Louka SF, Christou S, State A, Johnson K, Raza M, Hsu S, Jombart T, Cori A; Sheffield COVID-19 Genomics Group; COVID-19 Genomics UK (COG-UK) consortium; CMMID COVID-19 working group; Evans CM, Partridge DG, Atkins KE, Hué S, de Silva TI. Lindsey BB, et al. Among authors: jombart t. Nat Commun. 2022 Feb 17;13(1):1013. doi: 10.1038/s41467-022-28681-2. Nat Commun. 2022. PMID: 35177648 Free PMC article. No abstract available.
The role of rapid diagnostics in managing Ebola epidemics.
Nouvellet P, Garske T, Mills HL, Nedjati-Gilani G, Hinsley W, Blake IM, Van Kerkhove MD, Cori A, Dorigatti I, Jombart T, Riley S, Fraser C, Donnelly CA, Ferguson NM. Nouvellet P, et al. Among authors: jombart t. Nature. 2015 Dec 3;528(7580):S109-16. doi: 10.1038/nature16041. Nature. 2015. PMID: 26633764 Free PMC article.
When are pathogen genome sequences informative of transmission events?
Campbell F, Strang C, Ferguson N, Cori A, Jombart T. Campbell F, et al. Among authors: jombart t. PLoS Pathog. 2018 Feb 8;14(2):e1006885. doi: 10.1371/journal.ppat.1006885. eCollection 2018 Feb. PLoS Pathog. 2018. PMID: 29420641 Free PMC article.
outbreaker2: a modular platform for outbreak reconstruction.
Campbell F, Didelot X, Fitzjohn R, Ferguson N, Cori A, Jombart T. Campbell F, et al. Among authors: jombart t. BMC Bioinformatics. 2018 Oct 22;19(Suppl 11):363. doi: 10.1186/s12859-018-2330-z. BMC Bioinformatics. 2018. PMID: 30343663 Free PMC article.
Publisher Correction: Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis.
Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N, Harris D, Chieu TTB, Van Vinh Chau N, Campbell J, Schultsz C, Parkhill J, Bentley SD, Langford PR, Rycroft AN, Wren BW, Farrar J, Baker S, Hoa NT, Holden MTG, Tucker AW, Maskell DJ; BRaDP1T Consortium. Weinert LA, et al. Among authors: jombart t. Nat Commun. 2019 Nov 22;10(1):5326. doi: 10.1038/s41467-019-13138-w. Nat Commun. 2019. PMID: 31757940 Free PMC article.
The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study.
Prem K, Liu Y, Russell TW, Kucharski AJ, Eggo RM, Davies N; Centre for the Mathematical Modelling of Infectious Diseases COVID-19 Working Group; Jit M, Klepac P. Prem K, et al. Lancet Public Health. 2020 May;5(5):e261-e270. doi: 10.1016/S2468-2667(20)30073-6. Epub 2020 Mar 25. Lancet Public Health. 2020. PMID: 32220655 Free PMC article.
131 results