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Unsupervised machine learning for identifying important visual features through bag-of-words using histopathology data from chronic kidney disease.
Lee J, Warner E, Shaikhouni S, Bitzer M, Kretzler M, Gipson D, Pennathur S, Bellovich K, Bhat Z, Gadegbeku C, Massengill S, Perumal K, Saha J, Yang Y, Luo J, Zhang X, Mariani L, Hodgin JB, Rao A; C-PROBE Study. Lee J, et al. Among authors: yang y. Sci Rep. 2022 Mar 22;12(1):4832. doi: 10.1038/s41598-022-08974-8. Sci Rep. 2022. PMID: 35318420 Free PMC article.
SARS-CoV-2 receptor networks in diabetic and COVID-19 associated kidney disease.
Menon R, Otto EA, Sealfon R, Nair V, Wong AK, Theesfeld CL, Chen X, Wang Y, Boppanna A, Luo J, Yang Y, Kasson PM, Schaub JA, Berthier CC, Eddy S, Lienczewski CC, Godfrey B, Dagenais SL, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker HC, Harder JL, Mariani LH, Hodgin JB, Sexton JZ, Wobus CE, Naik AS, Nelson RG, Troyanskaya OG, Kretzler M. Menon R, et al. Among authors: yang y. medRxiv [Preprint]. 2020 Aug 21:2020.05.09.20096511. doi: 10.1101/2020.05.09.20096511. medRxiv. 2020. PMID: 32511461 Free PMC article. Updated. Preprint.
SARS-CoV-2 receptor networks in diabetic and COVID-19-associated kidney disease.
Menon R, Otto EA, Sealfon R, Nair V, Wong AK, Theesfeld CL, Chen X, Wang Y, Boppana AS, Luo J, Yang Y, Kasson PM, Schaub JA, Berthier CC, Eddy S, Lienczewski CC, Godfrey B, Dagenais SL, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker HC, Harder JL, Mariani LH, Hodgin JB, Sexton JZ, Wobus CE, Naik AS, Nelson RG, Troyanskaya OG, Kretzler M. Menon R, et al. Among authors: yang y. Kidney Int. 2020 Dec;98(6):1502-1518. doi: 10.1016/j.kint.2020.09.015. Epub 2020 Oct 8. Kidney Int. 2020. PMID: 33038424 Free PMC article.
Clustering-based spatial analysis (CluSA) framework through graph neural network for chronic kidney disease prediction using histopathology images.
Lee J, Warner E, Shaikhouni S, Bitzer M, Kretzler M, Gipson D, Pennathur S, Bellovich K, Bhat Z, Gadegbeku C, Massengill S, Perumal K, Saha J, Yang Y, Luo J, Zhang X, Mariani L, Hodgin JB, Rao A. Lee J, et al. Among authors: yang y. Sci Rep. 2023 Aug 5;13(1):12701. doi: 10.1038/s41598-023-39591-8. Sci Rep. 2023. PMID: 37543648 Free PMC article.
Near-Single-Cell Proteomics Profiling of the Proximal Tubular and Glomerulus of the Normal Human Kidney.
Sigdel TK, Piehowski PD, Roy S, Liberto J, Hansen JR, Swensen AC, Zhao R, Zhu Y, Rashmi P, Schroeder A, Damm I, Sur S, Luo J, Yang Y, Qian WJ, Sarwal MM; Kidney Precision Medicine Project (KPMP) Consortium. Sigdel TK, et al. Among authors: yang y. Front Med (Lausanne). 2020 Sep 17;7:499. doi: 10.3389/fmed.2020.00499. eCollection 2020. Front Med (Lausanne). 2020. PMID: 33072769 Free PMC article.
Corrigendum: Near-Single-Cell Proteomics Profiling of the Proximal Tubular and Glomerulus of the Normal Human Kidney.
Sigdel TK, Piehowski PD, Roy S, Liberto J, Hansen JR, Swensen AC, Zhao R, Zhu Y, Rashmi P, Schroeder A, Damm I, Sur S, Luo J, Yang Y, Qian WJ, Sarwal MM. Sigdel TK, et al. Among authors: yang y. Front Med (Lausanne). 2021 Jan 12;7:625788. doi: 10.3389/fmed.2020.625788. eCollection 2020. Front Med (Lausanne). 2021. PMID: 33511148 Free PMC article.
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