Huang L - Search Results

1

TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data.

Huang L, Rosen JD, Sun Q, Chen J, Wheeler MM, Zhou Y, Min YI, Kooperberg C, Conomos MP, Stilp AM, Rich SS, Rotter JI, Manichaikul A, Loos RJF, Kenny EE, Blackwell TW, Smith AV, Jun G, Sedlazeck FJ, Metcalf G, Boerwinkle E; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Raffield LM, Reiner AP, Auer PL, Li Y. Huang L, et al. Am J Hum Genet. 2022 Jun 2;109(6):1175-1181. doi: 10.1016/j.ajhg.2022.04.006. Epub 2022 May 2. Am J Hum Genet. 2022. PMID: 35504290 Free PMC article.

2

Analyses of biomarker traits in diverse UK biobank participants identify associations missed by European-centric analysis strategies.

Sun Q, Graff M, Rowland B, Wen J, Huang L, Miller-Fleming TW, Haessler J, Preuss MH, Chai JF, Lee MP, Avery CL, Cheng CY, Franceschini N, Sim X, Cox NJ, Kooperberg C, North KE, Li Y, Raffield LM. Sun Q, et al. Among authors: huang l. J Hum Genet. 2022 Feb;67(2):87-93. doi: 10.1038/s10038-021-00968-0. Epub 2021 Aug 11. J Hum Genet. 2022. PMID: 34376796 Free PMC article.

3

eSCAN: scan regulatory regions for aggregate association testing using whole-genome sequencing data.

Yang Y, Sun Q, Huang L, Broome JG, Correa A, Reiner A; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Raffield LM, Yang Y, Li Y. Yang Y, et al. Among authors: huang l. Brief Bioinform. 2022 Jan 17;23(1):bbab497. doi: 10.1093/bib/bbab497. Brief Bioinform. 2022. PMID: 34882196 Free PMC article.

4

From GWAS variant to function: A study of ∼148,000 variants for blood cell traits.

Sun Q, Crowley CA, Huang L, Wen J, Chen J, Bao EL, Auer PL, Lettre G, Reiner AP, Sankaran VG, Raffield LM, Li Y. Sun Q, et al. Among authors: huang l. HGG Adv. 2021 Oct 7;3(1):100063. doi: 10.1016/j.xhgg.2021.100063. eCollection 2022 Jan 13. HGG Adv. 2021. PMID: 35047852 Free PMC article.

5

Leveraging TOPMed imputation server and constructing a cohort-specific imputation reference panel to enhance genotype imputation among cystic fibrosis patients.

Sun Q, Liu W, Rosen JD, Huang L, Pace RG, Dang H, Gallins PJ, Blue EE, Ling H, Corvol H, Strug LJ, Bamshad MJ, Gibson RL, Pugh EW, Blackman SM, Cutting GR, O'Neal WK, Zhou YH, Wright FA, Knowles MR, Wen J, Li Y; Cystic Fibrosis Genome Project. Sun Q, et al. Among authors: huang l. HGG Adv. 2022 Jan 11;3(2):100090. doi: 10.1016/j.xhgg.2022.100090. eCollection 2022 Apr 14. HGG Adv. 2022. PMID: 35128485 Free PMC article.

6

Innovative computational approaches shed light on genetic mechanisms underlying cognitive impairment among children born extremely preterm.

Liu W, Sun Q, Huang L, Bhattacharya A, Wang GW, Tan X, Kuban KCK, Joseph RM, O'Shea TM, Fry RC, Li Y, Santos HP Jr. Liu W, et al. Among authors: huang l. J Neurodev Disord. 2022 Mar 3;14(1):16. doi: 10.1186/s11689-022-09429-x. J Neurodev Disord. 2022. PMID: 35240980 Free PMC article.

7

A systematic evaluation of Hi-C data enhancement methods for enhancing PLAC-seq and HiChIP data.

Huang L, Yang Y, Li G, Jiang M, Wen J, Abnousi A, Rosen JD, Hu M, Li Y. Huang L, et al. Brief Bioinform. 2022 May 13;23(3):bbac145. doi: 10.1093/bib/bbac145. Brief Bioinform. 2022. PMID: 35488276 Free PMC article.

8

SnapHiC2: A computationally efficient loop caller for single cell Hi-C data.

Li X, Lee L, Abnousi A, Yu M, Liu W, Huang L, Li Y, Hu M. Li X, et al. Among authors: huang l. Comput Struct Biotechnol J. 2022 Jun 1;20:2778-2783. doi: 10.1016/j.csbj.2022.05.046. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35685374 Free PMC article.

9

Pleiotropic modifiers of age-related diabetes and neonatal intestinal obstruction in cystic fibrosis.

Aksit MA, Ling H, Pace RG, Raraigh KS, Onchiri F, Faino AV, Pagel K, Pugh E, Stilp AM, Sun Q, Blue EE, Wright FA, Zhou YH, Bamshad MJ, Gibson RL, Knowles MR, Cutting GR, Blackman SM; CF Genome Project. Aksit MA, et al. Am J Hum Genet. 2022 Oct 6;109(10):1894-1908. doi: 10.1016/j.ajhg.2022.09.004. Am J Hum Genet. 2022. PMID: 36206743 Free PMC article.

10

AcrFinder: genome mining anti-CRISPR operons in prokaryotes and their viruses.

Yi H, Huang L, Yang B, Gomez J, Zhang H, Yin Y. Yi H, et al. Among authors: huang l. Nucleic Acids Res. 2020 Jul 2;48(W1):W358-W365. doi: 10.1093/nar/gkaa351. Nucleic Acids Res. 2020. PMID: 32402073 Free PMC article.

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