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Wastewater-Based Estimation of the Effective Reproductive Number of SARS-CoV-2.
Huisman JS, Scire J, Caduff L, Fernandez-Cassi X, Ganesanandamoorthy P, Kull A, Scheidegger A, Stachler E, Boehm AB, Hughes B, Knudson A, Topol A, Wigginton KR, Wolfe MK, Kohn T, Ort C, Stadler T, Julian TR. Huisman JS, et al. Among authors: stadler t. Environ Health Perspect. 2022 May;130(5):57011. doi: 10.1289/EHP10050. Epub 2022 May 26. Environ Health Perspect. 2022. PMID: 35617001 Free PMC article.
Transmission of ESBL-producing Enterobacteriaceae and their mobile genetic elements-identification of sources by whole genome sequencing: study protocol for an observational study in Switzerland.
Stadler T, Meinel D, Aguilar-Bultet L, Huisman JS, Schindler R, Egli A, Seth-Smith HMB, Eichenberger L, Brodmann P, Hübner P, Bagutti C, Tschudin-Sutter S. Stadler T, et al. BMJ Open. 2018 Feb 17;8(2):e021823. doi: 10.1136/bmjopen-2018-021823. BMJ Open. 2018. PMID: 29455172 Free PMC article.
Reproductive number of the COVID-19 epidemic in Switzerland with a focus on the Cantons of Basel-Stadt and Basel-Landschaft.
Scire J, Nadeau S, Vaughan T, Brupbacher G, Fuchs S, Sommer J, Koch KN, Misteli R, Mundorff L, Götz T, Eichenberger T, Quinto C, Savic M, Meienberg A, Burkard T, Mayr M, Meier CA, Widmer A, Kuehl R, Egli A, Hirsch HH, Bassetti S, Nickel CH, Rentsch KS, Kübler W, Bingisser R, Battegay M, Tschudin-Sutter S, Stadler T. Scire J, et al. Among authors: stadler t. Swiss Med Wkly. 2020 May 4;150:w20271. doi: 10.4414/smw.2020.20271. eCollection 2020 May 4. Swiss Med Wkly. 2020. PMID: 32365217 Free article.
Practical considerations for measuring the effective reproductive number, R t.
Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay J, De Salazar PM, Hellewell J, Meakin S, Munday J, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S. Gostic KM, et al. Among authors: stadler t. medRxiv [Preprint]. 2020 Aug 28:2020.06.18.20134858. doi: 10.1101/2020.06.18.20134858. medRxiv. 2020. PMID: 32607522 Free PMC article. Updated. Preprint.
Practical considerations for measuring the effective reproductive number, Rt.
Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay JA, De Salazar PM, Hellewell J, Meakin S, Munday JD, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S. Gostic KM, et al. Among authors: stadler t. PLoS Comput Biol. 2020 Dec 10;16(12):e1008409. doi: 10.1371/journal.pcbi.1008409. eCollection 2020 Dec. PLoS Comput Biol. 2020. PMID: 33301457 Free PMC article.
The origin and early spread of SARS-CoV-2 in Europe.
Nadeau SA, Vaughan TG, Scire J, Huisman JS, Stadler T. Nadeau SA, et al. Among authors: stadler t. Proc Natl Acad Sci U S A. 2021 Mar 2;118(9):e2012008118. doi: 10.1073/pnas.2012008118. Proc Natl Acad Sci U S A. 2021. PMID: 33571105 Free PMC article.
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020.
Hodcroft EB, Zuber M, Nadeau S, Vaughan TG, Crawford KHD, Althaus CL, Reichmuth ML, Bowen JE, Walls AC, Corti D, Bloom JD, Veesler D, Mateo D, Hernando A, Comas I, González-Candelas F; SeqCOVID-SPAIN consortium; Stadler T, Neher RA. Hodcroft EB, et al. Among authors: stadler t. Nature. 2021 Jul;595(7869):707-712. doi: 10.1038/s41586-021-03677-y. Epub 2021 Jun 7. Nature. 2021. PMID: 34098568
Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland.
Chen C, Nadeau SA, Topolsky I, Manceau M, Huisman JS, Jablonski KP, Fuhrmann L, Dreifuss D, Jahn K, Beckmann C, Redondo M, Noppen C, Risch L, Risch M, Wohlwend N, Kas S, Bodmer T, Roloff T, Stange M, Egli A, Eckerle I, Kaiser L, Denes R, Feldkamp M, Nissen I, Santacroce N, Burcklen E, Aquino C, de Gouvea AC, Moccia MD, Grüter S, Sykes T, Opitz L, White G, Neff L, Popovic D, Patrignani A, Tracy J, Schlapbach R, Dermitzakis ET, Harshman K, Xenarios I, Pegeot H, Cerutti L, Penet D, Blin A, Elies M, Althaus CL, Beisel C, Beerenwinkel N, Ackermann M, Stadler T. Chen C, et al. Among authors: stadler t. Epidemics. 2021 Dec;37:100480. doi: 10.1016/j.epidem.2021.100480. Epub 2021 Aug 9. Epidemics. 2021. PMID: 34488035 Free PMC article.
272 results