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Kabuki syndrome stem cell models reveal locus specificity of histone methyltransferase 2D (KMT2D/MLL4).
Jefri M, Zhang X, Stumpf PS, Zhang L, Peng H, Hettige N, Theroux JF, Aouabed Z, Wilson K, Deshmukh S, Antonyan L, Ni A, Alsuwaidi S, Zhang Y, Jabado N, Garcia BA, Schuppert A, Bjornsson HT, Ernst C. Jefri M, et al. Among authors: stumpf ps. Hum Mol Genet. 2022 Oct 28;31(21):3715-3728. doi: 10.1093/hmg/ddac121. Hum Mol Genet. 2022. PMID: 35640156 Free PMC article.
Lesch-Nyhan disease causes impaired energy metabolism and reduced developmental potential in midbrain dopaminergic cells.
Bell S, McCarty V, Peng H, Jefri M, Hettige N, Antonyan L, Crapper L, O'Leary LA, Zhang X, Zhang Y, Wu H, Sutcliffe D, Kolobova I, Rosenberger TA, Moquin L, Gratton A, Popic J, Gantois I, Stumpf PS, Schuppert AA, Mechawar N, Sonenberg N, Tremblay ML, Jinnah HA, Ernst C. Bell S, et al. Among authors: stumpf ps. Stem Cell Reports. 2021 Jul 13;16(7):1749-1762. doi: 10.1016/j.stemcr.2021.06.003. Epub 2021 Jul 1. Stem Cell Reports. 2021. PMID: 34214487 Free PMC article.
FOXG1 targets BMP repressors and cell cycle inhibitors in human neural progenitor cells.
Hettige NC, Fleming P, Semenak A, Zhang X, Peng H, Hagel MD, Théroux JF, Zhang Y, Ni A, Jefri M, Antonyan L, Alsuwaidi S, Schuppert A, Stumpf PS, Ernst C. Hettige NC, et al. Among authors: stumpf ps. Hum Mol Genet. 2023 Jul 20;32(15):2511-2522. doi: 10.1093/hmg/ddad089. Hum Mol Genet. 2023. PMID: 37216650 Free PMC article.
Stem Cell Differentiation as a Non-Markov Stochastic Process.
Stumpf PS, Smith RCG, Lenz M, Schuppert A, Müller FJ, Babtie A, Chan TE, Stumpf MPH, Please CP, Howison SD, Arai F, MacArthur BD. Stumpf PS, et al. Among authors: stumpf mph. Cell Syst. 2017 Sep 27;5(3):268-282.e7. doi: 10.1016/j.cels.2017.08.009. Cell Syst. 2017. PMID: 28957659 Free PMC article.
Nanog-dependent feedback loops regulate murine embryonic stem cell heterogeneity.
MacArthur BD, Sevilla A, Lenz M, Müller FJ, Schuldt BM, Schuppert AA, Ridden SJ, Stumpf PS, Fidalgo M, Ma'ayan A, Wang J, Lemischka IR. MacArthur BD, et al. Among authors: stumpf ps. Nat Cell Biol. 2012 Nov;14(11):1139-47. doi: 10.1038/ncb2603. Epub 2012 Oct 28. Nat Cell Biol. 2012. PMID: 23103910 Free PMC article.
Single-cell analyses and machine learning define hematopoietic progenitor and HSC-like cells derived from human PSCs.
Fidanza A, Stumpf PS, Ramachandran P, Tamagno S, Babtie A, Lopez-Yrigoyen M, Taylor AH, Easterbrook J, Henderson BEP, Axton R, Henderson NC, Medvinsky A, Ottersbach K, Romanò N, Forrester LM. Fidanza A, et al. Among authors: stumpf ps. Blood. 2020 Dec 17;136(25):2893-2904. doi: 10.1182/blood.2020006229. Blood. 2020. PMID: 32614947 Free PMC article.
Single-cell pluripotency regulatory networks.
Stumpf PS, Ewing R, MacArthur BD. Stumpf PS, et al. Proteomics. 2016 Sep;16(17):2303-12. doi: 10.1002/pmic.201500528. Epub 2016 Aug 12. Proteomics. 2016. PMID: 27357612
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