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Early progression to active tuberculosis is a highly heritable trait driven by 3q23 in Peruvians.
Luo Y, Suliman S, Asgari S, Amariuta T, Baglaenko Y, Martínez-Bonet M, Ishigaki K, Gutierrez-Arcelus M, Calderon R, Lecca L, León SR, Jimenez J, Yataco R, Contreras C, Galea JT, Becerra M, Nejentsev S, Nigrovic PA, Moody DB, Murray MB, Raychaudhuri S. Luo Y, et al. Among authors: raychaudhuri s. Nat Commun. 2019 Aug 21;10(1):3765. doi: 10.1038/s41467-019-11664-1. Nat Commun. 2019. PMID: 31434886 Free PMC article.
A positively selected FBN1 missense variant reduces height in Peruvian individuals.
Asgari S, Luo Y, Akbari A, Belbin GM, Li X, Harris DN, Selig M, Bartell E, Calderon R, Slowikowski K, Contreras C, Yataco R, Galea JT, Jimenez J, Coit JM, Farroñay C, Nazarian RM, O'Connor TD, Dietz HC, Hirschhorn JN, Guio H, Lecca L, Kenny EE, Freeman EE, Murray MB, Raychaudhuri S. Asgari S, et al. Among authors: raychaudhuri s. Nature. 2020 Jun;582(7811):234-239. doi: 10.1038/s41586-020-2302-0. Epub 2020 May 13. Nature. 2020. PMID: 32499652 Free PMC article.
HATK: HLA analysis toolkit.
Choi W, Luo Y, Raychaudhuri S, Han B. Choi W, et al. Among authors: raychaudhuri s. Bioinformatics. 2021 Apr 20;37(3):416-418. doi: 10.1093/bioinformatics/btaa684. Bioinformatics. 2021. PMID: 32735319 Free PMC article.
Accurate imputation of human leukocyte antigens with CookHLA.
Cook S, Choi W, Lim H, Luo Y, Kim K, Jia X, Raychaudhuri S, Han B. Cook S, et al. Among authors: raychaudhuri s. Nat Commun. 2021 Feb 24;12(1):1264. doi: 10.1038/s41467-021-21541-5. Nat Commun. 2021. PMID: 33627654 Free PMC article.
Multimodally profiling memory T cells from a tuberculosis cohort identifies cell state associations with demographics, environment and disease.
Nathan A, Beynor JI, Baglaenko Y, Suliman S, Ishigaki K, Asgari S, Huang CC, Luo Y, Zhang Z, Lopez K, Lindestam Arlehamn CS, Ernst JD, Jimenez J, Calderón RI, Lecca L, Van Rhijn I, Moody DB, Murray MB, Raychaudhuri S. Nathan A, et al. Among authors: raychaudhuri s. Nat Immunol. 2021 Jun;22(6):781-793. doi: 10.1038/s41590-021-00933-1. Epub 2021 May 24. Nat Immunol. 2021. PMID: 34031617 Free PMC article.
A sex-specific evolutionary interaction between ADCY9 and CETP.
Gamache I, Legault MA, Grenier JC, Sanchez R, Rhéaume E, Asgari S, Barhdadi A, Zada YF, Trochet H, Luo Y, Lecca L, Murray M, Raychaudhuri S, Tardif JC, Dubé MP, Hussin J. Gamache I, et al. Among authors: raychaudhuri s. Elife. 2021 Oct 5;10:e69198. doi: 10.7554/eLife.69198. Elife. 2021. PMID: 34609279 Free PMC article.
Efficient and precise single-cell reference atlas mapping with Symphony.
Kang JB, Nathan A, Weinand K, Zhang F, Millard N, Rumker L, Moody DB, Korsunsky I, Raychaudhuri S. Kang JB, et al. Among authors: raychaudhuri s. Nat Commun. 2021 Oct 7;12(1):5890. doi: 10.1038/s41467-021-25957-x. Nat Commun. 2021. PMID: 34620862 Free PMC article.
745 results