Zha Y - Search Results

1

Stage-specific roles of microbial dysbiosis and metabolic disorders in rheumatoid arthritis.

Cheng M, Zhao Y, Cui Y, Zhong C, Zha Y, Li S, Cao G, Li M, Zhang L, Ning K, Han J. Cheng M, et al. Among authors: zha y. Ann Rheum Dis. 2022 Aug 19;81(12):1669-77. doi: 10.1136/ard-2022-222871. Online ahead of print. Ann Rheum Dis. 2022. PMID: 35985811 Free PMC article.

2

The Seasonal Dynamics and the Influence of Human Activities on Campus Outdoor Microbial Communities.

Chen C, He R, Cheng Z, Han M, Zha Y, Yang P, Yao Q, Zhou H, Zhong C, Ning K. Chen C, et al. Among authors: zha y. Front Microbiol. 2019 Jul 10;10:1579. doi: 10.3389/fmicb.2019.01579. eCollection 2019. Front Microbiol. 2019. PMID: 31354673 Free PMC article.

3

Utilizing microbiome approaches to assist source tracking, treatment and prevention of COVID-19: Review and assessment.

Han M, Zha Y, Chong H, Zhong C, Ning K. Han M, et al. Among authors: zha y. Comput Struct Biotechnol J. 2020 Nov 20;18:3615-3622. doi: 10.1016/j.csbj.2020.11.027. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 33304459 Free PMC article. Review.

4

Microbiome Sample Comparison and Search: From Pair-Wise Calculations to Model-Based Matching.

Zha Y, Chong H, Ning K. Zha Y, et al. Front Microbiol. 2021 Apr 7;12:642439. doi: 10.3389/fmicb.2021.642439. eCollection 2021. Front Microbiol. 2021. PMID: 33897651 Free PMC article. Review.

5

Hidden link in gut-joint axis: gut microbes promote rheumatoid arthritis at early stage by enhancing ascorbate degradation.

Zhao Y, Cheng M, Zou L, Yin L, Zhong C, Zha Y, Zhu X, Zhang L, Ning K, Han J. Zhao Y, et al. Among authors: zha y. Gut. 2022 May;71(5):1041-1043. doi: 10.1136/gutjnl-2021-325209. Epub 2021 Jul 8. Gut. 2022. PMID: 34244347 Free PMC article. No abstract available.

6

Reliable and Interpretable Mortality Prediction With Strong Foresight in COVID-19 Patients: An International Study From China and Germany.

Bai T, Zhu X, Zhou X, Grathwohl D, Yang P, Zha Y, Jin Y, Chong H, Yu Q, Isberner N, Wang D, Zhang L, Kortüm KM, Song J, Rasche L, Einsele H, Ning K, Hou X. Bai T, et al. Among authors: zha y. Front Artif Intell. 2021 Sep 3;4:672050. doi: 10.3389/frai.2021.672050. eCollection 2021. Front Artif Intell. 2021. PMID: 34541519 Free PMC article.

7

Ontology-aware neural network: a general framework for pattern mining from microbiome data.

Zha Y, Ning K. Zha Y, et al. Brief Bioinform. 2022 Mar 10;23(2):bbac005. doi: 10.1093/bib/bbac005. Brief Bioinform. 2022. PMID: 35091743 Free PMC article.

8

Ontology-aware deep learning enables ultrafast and interpretable source tracking among sub-million microbial community samples from hundreds of niches.

Zha Y, Chong H, Qiu H, Kang K, Dun Y, Chen Z, Cui X, Ning K. Zha Y, et al. Genome Med. 2022 Apr 26;14(1):43. doi: 10.1186/s13073-022-01047-5. Genome Med. 2022. PMID: 35473941 Free PMC article.

9

Microbial Dark Matter: from Discovery to Applications.

Zha Y, Chong H, Yang P, Ning K. Zha Y, et al. Genomics Proteomics Bioinformatics. 2022 Oct;20(5):867-881. doi: 10.1016/j.gpb.2022.02.007. Epub 2022 Apr 26. Genomics Proteomics Bioinformatics. 2022. PMID: 35477055 Free PMC article. Review.

10

ContactLib-ATT: A Structure-Based Search Engine for Homologous Proteins.

Chen C, Zha Y, Zhu D, Ning K, Cui X. Chen C, et al. Among authors: zha y. IEEE/ACM Trans Comput Biol Bioinform. 2023 Nov-Dec;20(6):3421-3429. doi: 10.1109/TCBB.2022.3197802. Epub 2023 Dec 25. IEEE/ACM Trans Comput Biol Bioinform. 2023. PMID: 35947567

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