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Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy.
Parikh VN, Ioannidis AG, Jimenez-Morales D, Gorzynski JE, De Jong HN, Liu X, Roque J, Cepeda-Espinoza VP, Osoegawa K, Hughes C, Sutton SC, Youlton N, Joshi R, Amar D, Tanigawa Y, Russo D, Wong J, Lauzon JT, Edelson J, Mas Montserrat D, Kwon Y, Rubinacci S, Delaneau O, Cappello L, Kim J, Shoura MJ, Raja AN, Watson N, Hammond N, Spiteri E, Mallempati KC, Montero-Martín G, Christle J, Kim J, Kirillova A, Seo K, Huang Y, Zhao C, Moreno-Grau S, Hershman SG, Dalton KP, Zhen J, Kamm J, Bhatt KD, Isakova A, Morri M, Ranganath T, Blish CA, Rogers AJ, Nadeau K, Yang S, Blomkalns A, O'Hara R, Neff NF, DeBoever C, Szalma S, Wheeler MT, Gates CM, Farh K, Schroth GP, Febbo P, deSouza F, Cornejo OE, Fernandez-Vina M, Kistler A, Palacios JA, Pinsky BA, Bustamante CD, Rivas MA, Ashley EA. Parikh VN, et al. Among authors: rogers aj. Nat Commun. 2022 Aug 30;13(1):5107. doi: 10.1038/s41467-022-32397-8. Nat Commun. 2022. PMID: 36042219 Free PMC article.
A single-cell atlas of the peripheral immune response to severe COVID-19.
Wilk AJ, Rustagi A, Zhao NQ, Roque J, Martinez-Colon GJ, McKechnie JL, Ivison GT, Ranganath T, Vergara R, Hollis T, Simpson LJ, Grant P, Subramanian A, Rogers AJ, Blish CA. Wilk AJ, et al. Among authors: rogers aj. medRxiv [Preprint]. 2020 Apr 23:2020.04.17.20069930. doi: 10.1101/2020.04.17.20069930. medRxiv. 2020. PMID: 32511639 Free PMC article. Updated. Preprint.
A single-cell atlas of the peripheral immune response in patients with severe COVID-19.
Wilk AJ, Rustagi A, Zhao NQ, Roque J, Martínez-Colón GJ, McKechnie JL, Ivison GT, Ranganath T, Vergara R, Hollis T, Simpson LJ, Grant P, Subramanian A, Rogers AJ, Blish CA. Wilk AJ, et al. Among authors: rogers aj. Nat Med. 2020 Jul;26(7):1070-1076. doi: 10.1038/s41591-020-0944-y. Epub 2020 Jun 8. Nat Med. 2020. PMID: 32514174 Free PMC article.
Human B cell clonal expansion and convergent antibody responses to SARS-CoV-2.
Nielsen SCA, Yang F, Jackson KJL, Hoh RA, Röltgen K, Stevens B, Lee JY, Rustagi A, Rogers AJ, Powell AE, Najeeb J, Otrelo-Cardoso AR, Yost KE, Daniel B, Chang HY, Satpathy AT, Jardetzky TS, Kim PS, Wang TT, Pinsky BA, Blish CA, Boyd SD. Nielsen SCA, et al. Among authors: rogers aj. bioRxiv [Preprint]. 2020 Jul 9:2020.07.08.194456. doi: 10.1101/2020.07.08.194456. bioRxiv. 2020. PMID: 32676593 Free PMC article. Updated. Preprint.
B cell clonal expansion and convergent antibody responses to SARS-CoV-2.
Nielsen SCA, Yang F, Hoh RA, Jackson KJL, Roeltgen K, Lee JY, Rustagi A, Rogers AJ, Powell AE, Kim PS, Wang TT, Pinsky B, Blish CA, Boyd SD. Nielsen SCA, et al. Among authors: rogers aj. Res Sq [Preprint]. 2020 May 6:rs.3.rs-27220. doi: 10.21203/rs.3.rs-27220/v1. Res Sq. 2020. PMID: 32702737 Free PMC article. Updated. Preprint.
Cytokine profile in plasma of severe COVID-19 does not differ from ARDS and sepsis.
Wilson JG, Simpson LJ, Ferreira AM, Rustagi A, Roque J, Asuni A, Ranganath T, Grant PM, Subramanian A, Rosenberg-Hasson Y, Maecker HT, Holmes SP, Levitt JE, Blish CA, Rogers AJ. Wilson JG, et al. Among authors: rogers aj. JCI Insight. 2020 Sep 3;5(17):e140289. doi: 10.1172/jci.insight.140289. JCI Insight. 2020. PMID: 32706339 Free PMC article.
Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2.
Nielsen SCA, Yang F, Jackson KJL, Hoh RA, Röltgen K, Jean GH, Stevens BA, Lee JY, Rustagi A, Rogers AJ, Powell AE, Hunter M, Najeeb J, Otrelo-Cardoso AR, Yost KE, Daniel B, Nadeau KC, Chang HY, Satpathy AT, Jardetzky TS, Kim PS, Wang TT, Pinsky BA, Blish CA, Boyd SD. Nielsen SCA, et al. Among authors: rogers aj. Cell Host Microbe. 2020 Oct 7;28(4):516-525.e5. doi: 10.1016/j.chom.2020.09.002. Epub 2020 Sep 3. Cell Host Microbe. 2020. PMID: 32941787 Free PMC article.
Defining the features and duration of antibody responses to SARS-CoV-2 infection associated with disease severity and outcome.
Röltgen K, Powell AE, Wirz OF, Stevens BA, Hogan CA, Najeeb J, Hunter M, Wang H, Sahoo MK, Huang C, Yamamoto F, Manohar M, Manalac J, Otrelo-Cardoso AR, Pham TD, Rustagi A, Rogers AJ, Shah NH, Blish CA, Cochran JR, Jardetzky TS, Zehnder JL, Wang TT, Narasimhan B, Gombar S, Tibshirani R, Nadeau KC, Kim PS, Pinsky BA, Boyd SD. Röltgen K, et al. Among authors: rogers aj. Sci Immunol. 2020 Dec 7;5(54):eabe0240. doi: 10.1126/sciimmunol.abe0240. Sci Immunol. 2020. PMID: 33288645 Free PMC article.
SARS-CoV-2 RNAaemia predicts clinical deterioration and extrapulmonary complications from COVID-19.
Ram-Mohan N, Kim D, Zudock EJ, Hashemi MM, Tjandra KC, Rogers AJ, Blish CA, Nadeau KC, Newberry JA, Quinn JV, O'Hara R, Ashley E, Nguyen H, Jiang L, Hung P; Stanford COVID-19 Biobank Study Group; Blomkalns AL, Yang S. Ram-Mohan N, et al. Among authors: rogers aj. medRxiv [Preprint]. 2020 Dec 22:2020.12.19.20248561. doi: 10.1101/2020.12.19.20248561. medRxiv. 2020. PMID: 33398290 Free PMC article. Updated. Preprint.
313 results