Zhang B - Search Results

1

Characterizing the composition of iPSC derived cells from bulk transcriptomics data with CellMap.

Ouyang Z, Bourgeois-Tchir N, Lyashenko E, Cundiff PE, Cullen PF, Challa R, Li K, Zhang X, Casey F, Engle SJ, Zhang B, Zavodszky MI. Ouyang Z, et al. Among authors: zhang b, zhang x. Sci Rep. 2022 Oct 17;12(1):17394. doi: 10.1038/s41598-022-22115-1. Sci Rep. 2022. PMID: 36253414 Free PMC article.

2

Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion.

Zhao S, Zhang Y, Gamini R, Zhang B, von Schack D. Zhao S, et al. Among authors: zhang b, zhang y. Sci Rep. 2018 Mar 19;8(1):4781. doi: 10.1038/s41598-018-23226-4. Sci Rep. 2018. PMID: 29556074 Free PMC article.

3

Computational identification and validation of alternative splicing in ZSF1 rat RNA-seq data, a preclinical model for type 2 diabetic nephropathy.

Zhang C, Dower K, Zhang B, Martinez RV, Lin LL, Zhao S. Zhang C, et al. Among authors: zhang b. Sci Rep. 2018 May 16;8(1):7624. doi: 10.1038/s41598-018-26035-x. Sci Rep. 2018. PMID: 29769602 Free PMC article.

4

Cx3cr1-deficient microglia exhibit a premature aging transcriptome.

Gyoneva S, Hosur R, Gosselin D, Zhang B, Ouyang Z, Cotleur AC, Peterson M, Allaire N, Challa R, Cullen P, Roberts C, Miao K, Reynolds TL, Glass CK, Burkly L, Ransohoff RM. Gyoneva S, et al. Among authors: zhang b. Life Sci Alliance. 2019 Dec 2;2(6):e201900453. doi: 10.26508/lsa.201900453. Print 2019 Dec. Life Sci Alliance. 2019. PMID: 31792059 Free PMC article.

5

CHOmics: A web-based tool for multi-omics data analysis and interactive visualization in CHO cell lines.

Lin D, Yalamanchili HB, Zhang X, Lewis NE, Alves CS, Groot J, Arnsdorf J, Bjørn SP, Wulff T, Voldborg BG, Zhou Y, Zhang B. Lin D, et al. Among authors: zhang b, zhang x. PLoS Comput Biol. 2020 Dec 22;16(12):e1008498. doi: 10.1371/journal.pcbi.1008498. eCollection 2020 Dec. PLoS Comput Biol. 2020. PMID: 33351794 Free PMC article.

6

Genetic variation in the Mauritian cynomolgus macaque population reflects variation in the human population.

Wu H, Zhang X, Zhang B, Adkins K. Wu H, et al. Among authors: zhang b, zhang x. Gene. 2021 Jun 30;787:145648. doi: 10.1016/j.gene.2021.145648. Epub 2021 Apr 20. Gene. 2021. PMID: 33848572

7

Quickomics: exploring omics data in an intuitive, interactive and informative manner.

Gao B, Zhu J, Negi S, Zhang X, Gyoneva S, Casey F, Wei R, Zhang B. Gao B, et al. Among authors: zhang b, zhang x. Bioinformatics. 2021 Oct 25;37(20):3670-3672. doi: 10.1093/bioinformatics/btab255. Bioinformatics. 2021. PMID: 33901288

8

Benchmarking and optimization of a high-throughput sequencing based method for transgene sequence variant analysis in biotherapeutic cell line development.

Groot J, Zhou Y, Marshall E, Cullen P, Carlile T, Lin D, Xu CF, Crisafulli J, Sun C, Casey F, Zhang B, Alves C. Groot J, et al. Among authors: zhang b. Biotechnol J. 2021 Aug;16(8):e2000548. doi: 10.1002/biot.202000548. Epub 2021 Jun 3. Biotechnol J. 2021. PMID: 34018310

9

Next-generation Bruton's tyrosine kinase inhibitor BIIB091 selectively and potently inhibits B cell and Fc receptor signaling and downstream functions in B cells and myeloid cells.

Bame E, Tang H, Burns JC, Arefayene M, Michelsen K, Ma B, Marx I, Prince R, Roach AM, Poreci U, Donaldson D, Cullen P, Casey F, Zhu J, Carlile TM, Sangurdekar D, Zhang B, Trapa P, Santoro J, Muragan P, Pellerin A, Rubino S, Gianni D, Bajrami B, Peng X, Coppell A, Riester K, Belachew S, Mehta D, Palte M, Hopkins BT, Scaramozza M, Franchimont N, Mingueneau M. Bame E, et al. Among authors: zhang b. Clin Transl Immunology. 2021 Jun 14;10(6):e1295. doi: 10.1002/cti2.1295. eCollection 2021. Clin Transl Immunology. 2021. PMID: 34141433 Free PMC article.

10

CellDepot: A Unified Repository for scRNA-seq Data and Visual Exploration.

Lin D, Chen Y, Negi S, Cheng D, Ouyang Z, Sexton D, Li K, Zhang B. Lin D, et al. Among authors: zhang b. J Mol Biol. 2022 Jun 15;434(11):167425. doi: 10.1016/j.jmb.2021.167425. Epub 2021 Dec 28. J Mol Biol. 2022. PMID: 34971674 Free article.

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