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Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.
Nucleic Acids Res. 2023 Jan 6;51(D1):D678-D689. doi: 10.1093/nar/gkac1003.
Nucleic Acids Res. 2023.
PMID: 36350631
Free PMC article.
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.
Davis JJ, Wattam AR, Aziz RK, Brettin T, Butler R, Butler RM, Chlenski P, Conrad N, Dickerman A, Dietrich EM, Gabbard JL, Gerdes S, Guard A, Kenyon RW, Machi D, Mao C, Murphy-Olson D, Nguyen M, Nordberg EK, Olsen GJ, Olson RD, Overbeek JC, Overbeek R, Parrello B, Pusch GD, Shukla M, Thomas C, VanOeffelen M, Vonstein V, Warren AS, Xia F, Xie D, Yoo H, Stevens R.
Davis JJ, et al. Among authors: vanoeffelen m.
Nucleic Acids Res. 2020 Jan 8;48(D1):D606-D612. doi: 10.1093/nar/gkz943.
Nucleic Acids Res. 2020.
PMID: 31667520
Free PMC article.
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Predicting antimicrobial resistance using conserved genes.
Nguyen M, Olson R, Shukla M, VanOeffelen M, Davis JJ.
Nguyen M, et al. Among authors: vanoeffelen m.
PLoS Comput Biol. 2020 Oct 19;16(10):e1008319. doi: 10.1371/journal.pcbi.1008319. eCollection 2020 Oct.
PLoS Comput Biol. 2020.
PMID: 33075053
Free PMC article.
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A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes.
VanOeffelen M, Nguyen M, Aytan-Aktug D, Brettin T, Dietrich EM, Kenyon RW, Machi D, Mao C, Olson R, Pusch GD, Shukla M, Stevens R, Vonstein V, Warren AS, Wattam AR, Yoo H, Davis JJ.
VanOeffelen M, et al.
Brief Bioinform. 2021 Nov 5;22(6):bbab313. doi: 10.1093/bib/bbab313.
Brief Bioinform. 2021.
PMID: 34379107
Free PMC article.
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PATRIC as a unique resource for studying antimicrobial resistance.
Antonopoulos DA, Assaf R, Aziz RK, Brettin T, Bun C, Conrad N, Davis JJ, Dietrich EM, Disz T, Gerdes S, Kenyon RW, Machi D, Mao C, Murphy-Olson DE, Nordberg EK, Olsen GJ, Olson R, Overbeek R, Parrello B, Pusch GD, Santerre J, Shukla M, Stevens RL, VanOeffelen M, Vonstein V, Warren AS, Wattam AR, Xia F, Yoo H.
Antonopoulos DA, et al. Among authors: vanoeffelen m.
Brief Bioinform. 2019 Jul 19;20(4):1094-1102. doi: 10.1093/bib/bbx083.
Brief Bioinform. 2019.
PMID: 28968762
Free PMC article.
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