Wang L - Search Results

1

A Clinician's Guide to Bioinformatics for Next-Generation Sequencing.

Larson NB, Oberg AL, Adjei AA, Wang L. Larson NB, et al. Among authors: wang l. J Thorac Oncol. 2023 Feb;18(2):143-157. doi: 10.1016/j.jtho.2022.11.006. Epub 2022 Nov 12. J Thorac Oncol. 2023. PMID: 36379355 Free PMC article. Review.

2

CpGtools: a python package for DNA methylation analysis.

Wei T, Nie J, Larson NB, Ye Z, Eckel-Passow JE, Robertson KD, Kocher JA, Wang L. Wei T, et al. Among authors: wang l. Bioinformatics. 2021 Jul 12;37(11):1598-1599. doi: 10.1093/bioinformatics/btz916. Bioinformatics. 2021. PMID: 31808791 Free PMC article.

3

PVAAS: identify variants associated with aberrant splicing from RNA-seq.

Wang L, Nie JJ, Kocher JP. Wang L, et al. Bioinformatics. 2015 May 15;31(10):1668-70. doi: 10.1093/bioinformatics/btv001. Epub 2015 Jan 7. Bioinformatics. 2015. PMID: 25573917 Free PMC article.

4

Genome Wide Approaches to Identify Protein-DNA Interactions.

Ma T, Ye Z, Wang L. Ma T, et al. Among authors: wang l. Curr Med Chem. 2019;26(42):7641-7654. doi: 10.2174/0929867325666180530115711. Curr Med Chem. 2019. PMID: 29848263 Review.

5

Prevalent Homozygous Deletions of Type I Interferon and Defensin Genes in Human Cancers Associate with Immunotherapy Resistance.

Ye Z, Dong H, Li Y, Ma T, Huang H, Leong HS, Eckel-Passow J, Kocher JA, Liang H, Wang L. Ye Z, et al. Among authors: wang l. Clin Cancer Res. 2018 Jul 15;24(14):3299-3308. doi: 10.1158/1078-0432.CCR-17-3008. Epub 2018 Apr 4. Clin Cancer Res. 2018. PMID: 29618619 Free PMC article.

6

Impact of library preparation on downstream analysis and interpretation of RNA-Seq data: comparison between Illumina PolyA and NuGEN Ovation protocol.

Sun Z, Asmann YW, Nair A, Zhang Y, Wang L, Kalari KR, Bhagwate AV, Baker TR, Carr JM, Kocher JP, Perez EA, Thompson EA. Sun Z, et al. Among authors: wang l. PLoS One. 2013 Aug 19;8(8):e71745. doi: 10.1371/journal.pone.0071745. eCollection 2013. PLoS One. 2013. PMID: 23977132 Free PMC article.

7

CrossMap: a versatile tool for coordinate conversion between genome assemblies.

Zhao H, Sun Z, Wang J, Huang H, Kocher JP, Wang L. Zhao H, et al. Among authors: wang l, wang j. Bioinformatics. 2014 Apr 1;30(7):1006-7. doi: 10.1093/bioinformatics/btt730. Epub 2013 Dec 18. Bioinformatics. 2014. PMID: 24351709 Free PMC article.

8

Quality control of RNA-seq experiments.

Li X, Nair A, Wang S, Wang L. Li X, et al. Among authors: wang l, wang s. Methods Mol Biol. 2015;1269:137-46. doi: 10.1007/978-1-4939-2291-8_8. Methods Mol Biol. 2015. PMID: 25577376

9

LncRNA MALAT1 enhances oncogenic activities of EZH2 in castration-resistant prostate cancer.

Wang D, Ding L, Wang L, Zhao Y, Sun Z, Karnes RJ, Zhang J, Huang H. Wang D, et al. Among authors: wang l. Oncotarget. 2015 Dec 1;6(38):41045-55. doi: 10.18632/oncotarget.5728. Oncotarget. 2015. PMID: 26516927 Free PMC article.

10

Expression and Therapeutic Targeting of TROP-2 in Treatment-Resistant Prostate Cancer.

Sperger JM, Helzer KT, Stahlfeld CN, Jiang D, Singh A, Kaufmann KR, Niles DJ, Heninger E, Rydzewski NR, Wang L, Wang L, Yang R, Ren Y, Engle JW, Huang P, Kyriakopoulos CE, Slovin SF, Soule HR, Zhao SG, Kohli M, Tagawa ST, Cai W, Dehm SM, Lang JM. Sperger JM, et al. Among authors: wang l. Clin Cancer Res. 2023 Jun 13;29(12):2324-2335. doi: 10.1158/1078-0432.CCR-22-1305. Clin Cancer Res. 2023. PMID: 36939530 Free PMC article.

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