Duhaime M - Search Results

1

Evaluating the ecological hypothesis: early life salivary microbiome assembly predicts dental caries in a longitudinal case-control study.

Blostein F, Bhaumik D, Davis E, Salzman E, Shedden K, Duhaime M, Bakulski KM, McNeil DW, Marazita ML, Foxman B. Blostein F, et al. Among authors: duhaime m. Microbiome. 2022 Dec 26;10(1):240. doi: 10.1186/s40168-022-01442-5. Microbiome. 2022. PMID: 36567334 Free PMC article.

2

MetaboDirect: an analytical pipeline for the processing of FT-ICR MS-based metabolomic data.

Ayala-Ortiz C, Graf-Grachet N, Freire-Zapata V, Fudyma J, Hildebrand G, AminiTabrizi R, Howard-Varona C, Corilo YE, Hess N, Duhaime MB, Sullivan MB, Tfaily MM. Ayala-Ortiz C, et al. Among authors: duhaime mb. Microbiome. 2023 Feb 17;11(1):28. doi: 10.1186/s40168-023-01476-3. Microbiome. 2023. PMID: 36803638 Free PMC article.

3

Environment-specific virocell metabolic reprogramming.

Howard-Varona C, Lindback MM, Fudyma JD, Krongauz A, Solonenko NE, Zayed AA, Andreopoulos WB, Olson HM, Kim YM, Kyle JE, Del Rio TG, Adkins JN, Tfaily MM, Paul S, Sullivan MB, Duhaime MB. Howard-Varona C, et al. Among authors: duhaime mb. ISME J. 2024 Mar 29:wrae055. doi: 10.1093/ismejo/wrae055. Online ahead of print. ISME J. 2024. PMID: 38552150 Free article.

4

Informing the Exposure Landscape: The Fate of Microplastics in a Large Pelagic In-Lake Mesocosm Experiment.

Rochman CM, Bucci K, Langenfeld D, McNamee R, Veneruzzo C, Covernton GA, Gao GHY, Ghosh M, Cable RN, Hermabessiere L, Lazcano R, Paterson MJ, Rennie MD, Rooney RC, Helm P, Duhaime MB, Hoellein T, Jeffries KM, Hoffman MJ, Orihel DM, Provencher JF. Rochman CM, et al. Among authors: duhaime mb. Environ Sci Technol. 2024 May 7;58(18):7998-8008. doi: 10.1021/acs.est.3c08990. Epub 2024 Apr 17. Environ Sci Technol. 2024. PMID: 38629179 Free PMC article.

5

Benchmarking informatics approaches for virus discovery: caution is needed when combining in silico identification methods.

Hegarty B, Riddell V J, Bastien E, Langenfeld K, Lindback M, Saini JS, Wing A, Zhang J, Duhaime M. Hegarty B, et al. Among authors: duhaime m. mSystems. 2024 Mar 19;9(3):e0110523. doi: 10.1128/msystems.01105-23. Epub 2024 Feb 20. mSystems. 2024. PMID: 38376167 Free PMC article.

6

Genomic insights into the coupling of a Chlorella-like microeukaryote and sulfur bacteria in the chemocline of permanently stratified Lake Cadagno.

Saini JS, Manni M, Hassler C, Cable RN, Duhaime MB, Zdobnov EM. Saini JS, et al. Among authors: duhaime mb. ISME J. 2023 Jun;17(6):903-915. doi: 10.1038/s41396-023-01396-y. Epub 2023 Apr 8. ISME J. 2023. PMID: 37031343 Free PMC article.

7

Bacterial, Phytoplankton, and Viral Distributions and Their Biogeochemical Contexts in Meromictic Lake Cadagno Offer Insights into the Proterozoic Ocean Microbial Loop.

Saini JS, Hassler C, Cable R, Fourquez M, Danza F, Roman S, Tonolla M, Storelli N, Jacquet S, Zdobnov EM, Duhaime MB. Saini JS, et al. Among authors: duhaime mb. mBio. 2022 Aug 30;13(4):e0005222. doi: 10.1128/mbio.00052-22. Epub 2022 Jun 21. mBio. 2022. PMID: 35726916 Free PMC article.

8

A snapshot of the global drinking water virome: Diversity and metabolic potential vary with residual disinfectant use.

Hegarty B, Dai Z, Raskin L, Pinto A, Wigginton K, Duhaime M. Hegarty B, et al. Among authors: duhaime m. Water Res. 2022 Jun 30;218:118484. doi: 10.1016/j.watres.2022.118484. Epub 2022 Apr 21. Water Res. 2022. PMID: 35504157 Free article.

9

Cross-Hemisphere Study Reveals Geographically Ubiquitous, Plastic-Specific Bacteria Emerging from the Rare and Unexplored Biosphere.

Scales BS, Cable RN, Duhaime MB, Gerdts G, Fischer F, Fischer D, Mothes S, Hintzki L, Moldaenke L, Ruwe M, Kalinowski J, Kreikemeyer B, Pedrotti ML, Gorsky G, Elineau A, Labrenz M, Oberbeckmann S. Scales BS, et al. Among authors: duhaime mb. mSphere. 2021 Jun 30;6(3):e0085120. doi: 10.1128/mSphere.00851-20. Epub 2021 Jun 9. mSphere. 2021. PMID: 34106771 Free PMC article.

10

Erratum for Crossette et al., "Metagenomic Quantification of Genes with Internal Standards".

Crossette E, Gumm J, Langenfeld K, Raskin L, Duhaime M, Wigginton K. Crossette E, et al. Among authors: duhaime m. mBio. 2021 Jun 29;12(3):e0117421. doi: 10.1128/mBio.01174-21. Epub 2021 Jun 1. mBio. 2021. PMID: 34061600 Free PMC article. No abstract available.

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