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Long non-coding RNAs: definitions, functions, challenges and recommendations.
Mattick JS, Amaral PP, Carninci P, Carpenter S, Chang HY, Chen LL, Chen R, Dean C, Dinger ME, Fitzgerald KA, Gingeras TR, Guttman M, Hirose T, Huarte M, Johnson R, Kanduri C, Kapranov P, Lawrence JB, Lee JT, Mendell JT, Mercer TR, Moore KJ, Nakagawa S, Rinn JL, Spector DL, Ulitsky I, Wan Y, Wilusz JE, Wu M. Mattick JS, et al. Among authors: huarte m. Nat Rev Mol Cell Biol. 2023 Jun;24(6):430-447. doi: 10.1038/s41580-022-00566-8. Epub 2023 Jan 3. Nat Rev Mol Cell Biol. 2023. PMID: 36596869 Review.
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals.
Guttman M, Amit I, Garber M, French C, Lin MF, Feldser D, Huarte M, Zuk O, Carey BW, Cassady JP, Cabili MN, Jaenisch R, Mikkelsen TS, Jacks T, Hacohen N, Bernstein BE, Kellis M, Regev A, Rinn JL, Lander ES. Guttman M, et al. Among authors: huarte m. Nature. 2009 Mar 12;458(7235):223-7. doi: 10.1038/nature07672. Epub 2009 Feb 1. Nature. 2009. PMID: 19182780 Free PMC article.
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression.
Khalil AM, Guttman M, Huarte M, Garber M, Raj A, Rivea Morales D, Thomas K, Presser A, Bernstein BE, van Oudenaarden A, Regev A, Lander ES, Rinn JL. Khalil AM, et al. Among authors: huarte m. Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11667-72. doi: 10.1073/pnas.0904715106. Epub 2009 Jul 1. Proc Natl Acad Sci U S A. 2009. PMID: 19571010 Free PMC article.
Large non-coding RNAs: missing links in cancer?
Huarte M, Rinn JL. Huarte M, et al. Hum Mol Genet. 2010 Oct 15;19(R2):R152-61. doi: 10.1093/hmg/ddq353. Epub 2010 Aug 20. Hum Mol Genet. 2010. PMID: 20729297 Free PMC article. Review.
Analysis of copy number alterations reveals the lncRNA ALAL-1 as a regulator of lung cancer immune evasion.
Athie A, Marchese FP, González J, Lozano T, Raimondi I, Juvvuna PK, Abad A, Marin-Bejar O, Serizay J, Martínez D, Ajona D, Pajares MJ, Sandoval J, Montuenga LM, Kanduri C, Lasarte JJ, Huarte M. Athie A, et al. Among authors: huarte m. J Cell Biol. 2020 Sep 7;219(9):e201908078. doi: 10.1083/jcb.201908078. J Cell Biol. 2020. PMID: 32858747 Free PMC article.
83 results