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A single-cell massively parallel reporter assay detects cell-type-specific gene regulation.
Nat Genet. 2023 Feb;55(2):346-354. doi: 10.1038/s41588-022-01278-7. Epub 2023 Jan 12.
Nat Genet. 2023.
PMID: 36635387
Free PMC article.
Genomic environments scale the activities of diverse core promoters.
Hong CKY, Cohen BA.
Hong CKY, et al.
Genome Res. 2022 Jan;32(1):85-96. doi: 10.1101/gr.276025.121. Epub 2021 Dec 27.
Genome Res. 2022.
PMID: 34961747
Free PMC article.
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Effect of genomic and cellular environments on gene expression noise.
Hong CKY, Ramu A, Zhao S, Cohen BA.
Hong CKY, et al.
Genome Biol. 2024 May 24;25(1):137. doi: 10.1186/s13059-024-03277-9.
Genome Biol. 2024.
PMID: 38790076
Free PMC article.
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Single cell biology-a Keystone Symposia report.
Cable J, Elowitz MB, Domingos AI, Habib N, Itzkovitz S, Hamidzada H, Balzer MS, Yanai I, Liberali P, Whited J, Streets A, Cai L, Stergachis AB, Hong CKY, Keren L, Guilliams M, Alon U, Shalek AK, Hamel R, Pfau SJ, Raj A, Quake SR, Zhang NR, Fan J, Trapnell C, Wang B, Greenwald NF, Vento-Tormo R, Santos SDM, Spencer SL, Garcia HG, Arekatla G, Gaiti F, Arbel-Goren R, Rulands S, Junker JP, Klein AM, Morris SA, Murray JI, Galloway KE, Ratz M, Romeike M.
Cable J, et al. Among authors: hong cky.
Ann N Y Acad Sci. 2021 Dec;1506(1):74-97. doi: 10.1111/nyas.14692. Epub 2021 Oct 3.
Ann N Y Acad Sci. 2021.
PMID: 34605044
Review.
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Synthetic and genomic regulatory elements reveal aspects of cis-regulatory grammar in mouse embryonic stem cells.
King DM, Hong CKY, Shepherdson JL, Granas DM, Maricque BB, Cohen BA.
King DM, et al. Among authors: hong cky.
Elife. 2020 Feb 11;9:e41279. doi: 10.7554/eLife.41279.
Elife. 2020.
PMID: 32043966
Free PMC article.
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Targeting SALL4 by entinostat in lung cancer.
Yong KJ, Li A, Ou WB, Hong CK, Zhao W, Wang F, Tatetsu H, Yan B, Qi L, Fletcher JA, Yang H, Soo R, Tenen DG, Chai L.
Yong KJ, et al.
Oncotarget. 2016 Nov 15;7(46):75425-75440. doi: 10.18632/oncotarget.12251.
Oncotarget. 2016.
PMID: 27705911
Free PMC article.
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