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Incorporating Alternative Polygenic Risk Scores into the BOADICEA Breast Cancer Risk Prediction Model.
Mavaddat N, Ficorella L, Carver T, Lee A, Cunningham AP, Lush M, Dennis J, Tischkowitz M, Downes K, Hu D, Hahnen E, Schmutzler RK, Stockley TL, Downs GS, Zhang T, Chiarelli AM, Bojesen SE, Liu C, Chung WK, Pardo M, Feliubadaló L, Balmaña J, Simard J, Antoniou AC, Easton DF. Mavaddat N, et al. Among authors: liu c. Cancer Epidemiol Biomarkers Prev. 2023 Mar 6;32(3):422-427. doi: 10.1158/1055-9965.EPI-22-0756. Cancer Epidemiol Biomarkers Prev. 2023. PMID: 36649146 Free PMC article.
Generalizability of Polygenic Risk Scores for Breast Cancer Among Women With European, African, and Latinx Ancestry.
Liu C, Zeinomar N, Chung WK, Kiryluk K, Gharavi AG, Hripcsak G, Crew KD, Shang N, Khan A, Fasel D, Manolio TA, Jarvik GP, Rowley R, Justice AE, Rahm AK, Fullerton SM, Smoller JW, Larson EB, Crane PK, Dikilitas O, Wiesner GL, Bick AG, Terry MB, Weng C. Liu C, et al. JAMA Netw Open. 2021 Aug 2;4(8):e2119084. doi: 10.1001/jamanetworkopen.2021.19084. JAMA Netw Open. 2021. PMID: 34347061 Free PMC article.
Deep learning for rare disease: A scoping review.
Lee J, Liu C, Kim J, Chen Z, Sun Y, Rogers JR, Chung WK, Weng C. Lee J, et al. Among authors: liu c. J Biomed Inform. 2022 Nov;135:104227. doi: 10.1016/j.jbi.2022.104227. Epub 2022 Oct 17. J Biomed Inform. 2022. PMID: 36257483 Free article. Review.
Penetrance of Breast Cancer Susceptibility Genes From the eMERGE III Network.
Fan X, Wynn J, Shang N, Liu C, Fedotov A, Hallquist MLG, Buchanan AH, Williams MS, Smith ME, Hoell C, Rasmussen-Torvik LJ, Peterson JF, Wiesner GL, Murad AM, Jarvik GP, Gordon AS, Rosenthal EA, Stanaway IB, Crosslin DR, Larson EB, Leppig KA, Henrikson NB, Williams JL, Li R, Hebbring S, Weng C, Shen Y, Crew KD, Chung WK. Fan X, et al. Among authors: liu c. JNCI Cancer Spectr. 2021 May 8;5(4):pkab044. doi: 10.1093/jncics/pkab044. eCollection 2021 Aug. JNCI Cancer Spectr. 2021. PMID: 34377931 Free PMC article.
Genome-wide polygenic score to predict chronic kidney disease across ancestries.
Khan A, Turchin MC, Patki A, Srinivasasainagendra V, Shang N, Nadukuru R, Jones AC, Malolepsza E, Dikilitas O, Kullo IJ, Schaid DJ, Karlson E, Ge T, Meigs JB, Smoller JW, Lange C, Crosslin DR, Jarvik GP, Bhatraju PK, Hellwege JN, Chandler P, Torvik LR, Fedotov A, Liu C, Kachulis C, Lennon N, Abul-Husn NS, Cho JH, Ionita-Laza I, Gharavi AG, Chung WK, Hripcsak G, Weng C, Nadkarni G, Irvin MR, Tiwari HK, Kenny EE, Limdi NA, Kiryluk K. Khan A, et al. Among authors: liu c. Nat Med. 2022 Jul;28(7):1412-1420. doi: 10.1038/s41591-022-01869-1. Epub 2022 Jun 16. Nat Med. 2022. PMID: 35710995 Free PMC article.
Uncovering key clinical trial features influencing recruitment.
Idnay B, Fang Y, Butler A, Moran J, Li Z, Lee J, Ta C, Liu C, Yuan C, Chen H, Stanley E, Hripcsak G, Larson E, Marder K, Chung W, Ruotolo B, Weng C. Idnay B, et al. Among authors: liu c. J Clin Transl Sci. 2023 Sep 4;7(1):e199. doi: 10.1017/cts.2023.623. eCollection 2023. J Clin Transl Sci. 2023. PMID: 37830010 Free PMC article.
A metadata framework for computational phenotypes.
Spotnitz M, Acharya N, Cimino JJ, Murphy S, Namjou B, Crimmins N, Walunas T, Liu C, Crosslin D, Benoit B, Rosenthal E, Pacheco JA, Ostropolets A, Reyes Nieva H, Patterson JS, Richter LR, Callahan TJ, Elhussein A, Pang C, Kiryluk K, Nestor J, Khan A, Mohan S, Minty E, Chung W, Wei WQ, Natarajan K, Weng C. Spotnitz M, et al. Among authors: liu c. JAMIA Open. 2023 May 9;6(2):ooad032. doi: 10.1093/jamiaopen/ooad032. eCollection 2023 Jul. JAMIA Open. 2023. PMID: 37181728 Free PMC article.
Pathogenic variants in arteriopathy genes detected in a targeted sequencing study: Penetrance and 1-year outcomes after return of results.
Sherafati A, Elsekaily O, Saadatagah S, Kochan DC, Lee C, Wiesner GL, Liu C, Dellefave-Castillo L, Namjou B, Perez EF, Salvati ZM, Connolly JJ, Hakonarson H, Williams MS, Jarvik GP, Chung WK, McNally EM, Manolio TA, Kullo IJ. Sherafati A, et al. Among authors: liu c. Genet Med. 2022 Oct;24(10):2123-2133. doi: 10.1016/j.gim.2022.07.007. Epub 2022 Aug 10. Genet Med. 2022. PMID: 35943490 Free PMC article.
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