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Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic Competence.
Gaafar YZA, Westenberg M, Botermans M, László K, De Jonghe K, Foucart Y, Ferretti L, Kutnjak D, Pecman A, Mehle N, Kreuze J, Muller G, Vakirlis N, Beris D, Varveri C, Ziebell H. Gaafar YZA, et al. Among authors: vakirlis n. Pathogens. 2021 Sep 12;10(9):1174. doi: 10.3390/pathogens10091174. Pathogens. 2021. PMID: 34578206 Free PMC article.
Reconstruction of ancestral chromosome architecture and gene repertoire reveals principles of genome evolution in a model yeast genus.
Vakirlis N, Sarilar V, Drillon G, Fleiss A, Agier N, Meyniel JP, Blanpain L, Carbone A, Devillers H, Dubois K, Gillet-Markowska A, Graziani S, Huu-Vang N, Poirel M, Reisser C, Schott J, Schacherer J, Lafontaine I, Llorente B, Neuvéglise C, Fischer G. Vakirlis N, et al. Genome Res. 2016 Jul;26(7):918-32. doi: 10.1101/gr.204420.116. Epub 2016 May 31. Genome Res. 2016. PMID: 27247244 Free PMC article.
A Molecular Portrait of De Novo Genes in Yeasts.
Vakirlis N, Hebert AS, Opulente DA, Achaz G, Hittinger CT, Fischer G, Coon JJ, Lafontaine I. Vakirlis N, et al. Mol Biol Evol. 2018 Mar 1;35(3):631-645. doi: 10.1093/molbev/msx315. Mol Biol Evol. 2018. PMID: 29220506 Free PMC article.
Active in vivo translocation of the Methanosarcina mazei Gö1 Casposon.
Gehlert FO, Nickel L, Vakirlis N, Hammerschmidt K, Vargas Gebauer HI, Kießling C, Kupczok A, Schmitz RA. Gehlert FO, et al. Among authors: vakirlis n. Nucleic Acids Res. 2023 Jul 21;51(13):6927-6943. doi: 10.1093/nar/gkad474. Nucleic Acids Res. 2023. PMID: 37254817 Free PMC article.
Distinct chromosomal "niches" in the genome of Saccharomyces cerevisiae provide the background for genomic innovation and shape the fate of gene duplicates.
Stavropoulou A, Tassios E, Kalyva M, Georgoulopoulos M, Vakirlis N, Iliopoulos I, Nikolaou C. Stavropoulou A, et al. Among authors: vakirlis n. NAR Genom Bioinform. 2022 Nov 14;4(4):lqac086. doi: 10.1093/nargab/lqac086. eCollection 2022 Dec. NAR Genom Bioinform. 2022. PMID: 36381424 Free PMC article.
14 results