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The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles.
Schreiber J, Boix C, Wook Lee J, Li H, Guan Y, Chang CC, Chang JC, Hawkins-Hooker A, Schölkopf B, Schweikert G, Carulla MR, Canakoglu A, Guzzo F, Nanni L, Masseroli M, Carman MJ, Pinoli P, Hong C, Yip KY, Spence JP, Batra SS, Song YS, Mahony S, Zhang Z, Tan W, Shen Y, Sun Y, Shi M, Adrian J, Sandstrom R, Farrell N, Halow J, Lee K, Jiang L, Yang X, Epstein C, Strattan JS, Bernstein B, Snyder M, Kellis M, Stafford W, Kundaje A; ENCODE Imputation Challenge Participants. Schreiber J, et al. Among authors: snyder m. Genome Biol. 2023 Apr 18;24(1):79. doi: 10.1186/s13059-023-02915-y. Genome Biol. 2023. PMID: 37072822 Free PMC article.
Human exposome assessment platform.
Merino Martinez R, Müller H, Negru S, Ormenisan A, Arroyo Mühr LS, Zhang X, Trier Møller F, Clements MS, Kozlakidis Z, Pimenoff VN, Wilkowski B, Boeckhout M, Öhman H, Chong S, Holzinger A, Lehtinen M, van Veen EB, Bała P, Widschwendter M, Dowling J, Törnroos J, Snyder MP, Dillner J. Merino Martinez R, et al. Among authors: snyder mp. Environ Epidemiol. 2021 Dec 3;5(6):e182. doi: 10.1097/EE9.0000000000000182. eCollection 2021 Dec. Environ Epidemiol. 2021. PMID: 34909561 Free PMC article.
Post-GWAS multiomic functional investigation of the TNIP1 locus in Alzheimer's disease highlights a potential role for GPX3.
Panyard DJ, Reus LM, Ali M, Liu J, Deming YK, Lu Q, Kollmorgen G, Carboni M, Wild N, Visser PJ, Bertram L, Zetterberg H, Blennow K, Gobom J, Western D, Sung YJ, Carlsson CM, Johnson SC, Asthana S, Cruchaga C, Tijms BM, Engelman CD, Snyder MP. Panyard DJ, et al. Among authors: snyder mp. Alzheimers Dement. 2024 May 29. doi: 10.1002/alz.13848. Online ahead of print. Alzheimers Dement. 2024. PMID: 38809917
Pro Inflammatory Cytokines Profiles of Patients With Long COVID Differ Between Variant Epochs.
Ganesh R, Yadav S, Hurt RT, Mueller MR, Aakre CA, Gilman EA, Grach SL, Overgaard J, Snyder MR, Collins NM, Croghan IT, Badley AD, Razonable RR, Salonen BR. Ganesh R, et al. Among authors: snyder mr. J Prim Care Community Health. 2024 Jan-Dec;15:21501319241254751. doi: 10.1177/21501319241254751. J Prim Care Community Health. 2024. PMID: 38808863 Free PMC article.
Personalized transcriptome signatures in a cardiomyopathy stem cell biobank.
Monte E, Furihata T, Wang G, Perea-Gil I, Wei E, Chaib H, Nair R, Guevara JV, Mares R, Cheng X, Zhuge Y, Black K, Serrano R, Dagan-Rosenfeld O, Maguire P, Mercola M, Karakikes I, Wu JC, Snyder MP. Monte E, et al. Among authors: snyder mp. bioRxiv [Preprint]. 2024 May 14:2024.05.10.593618. doi: 10.1101/2024.05.10.593618. bioRxiv. 2024. PMID: 38798547 Free PMC article. Preprint.
Deconvolution of polygenic risk score in single cells unravels cellular and molecular heterogeneity of complex human diseases.
Zhang S, Shu H, Zhou J, Rubin-Sigler J, Yang X, Liu Y, Cooper-Knock J, Monte E, Zhu C, Tu S, Li H, Tong M, Ecker JR, Ichida JK, Shen Y, Zeng J, Tsao PS, Snyder MP. Zhang S, et al. Among authors: snyder mp. bioRxiv [Preprint]. 2024 May 14:2024.05.14.594252. doi: 10.1101/2024.05.14.594252. bioRxiv. 2024. PMID: 38798507 Free PMC article. Preprint.
2,303 results