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A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes.
Li R, Gong M, Zhang X, Wang F, Liu Z, Zhang L, Yang Q, Xu Y, Xu M, Zhang H, Zhang Y, Dai X, Gao Y, Zhang Z, Fang W, Yang Y, Fu W, Cao C, Yang P, Ghanatsaman ZA, Negari NJ, Nanaei HA, Yue X, Song Y, Lan X, Deng W, Wang X, Pan C, Xiang R, Ibeagha-Awemu EM, Heslop-Harrison PJS, Rosen BD, Lenstra JA, Gan S, Jiang Y. Li R, et al. Among authors: lenstra ja. Genome Res. 2023 Mar;33(3):463-477. doi: 10.1101/gr.277372.122. Epub 2023 Mar 27. Genome Res. 2023. PMID: 37310928 Free PMC article.
Geographic distribution of haplotype diversity at the bovine casein locus.
Jann OC, Ibeagha-Awemu EM, Ozbeyaz C, Zaragoza P, Williams JL, Ajmone-Marsan P, Lenstra JA, Moazami-Goudarzi K, Erhardt G. Jann OC, et al. Among authors: lenstra ja. Genet Sel Evol. 2004 Mar-Apr;36(2):243-57. doi: 10.1186/1297-9686-36-2-243. Genet Sel Evol. 2004. PMID: 15040901 Free PMC article.
Whole Mitogenomes Reveal the History of Swamp Buffalo: Initially Shaped by Glacial Periods and Eventually Modelled by Domestication.
Wang S, Chen N, Capodiferro MR, Zhang T, Lancioni H, Zhang H, Miao Y, Chanthakhoun V, Wanapat M, Yindee M, Zhang Y, Lu H, Caporali L, Dang R, Huang Y, Lan X, Plath M, Chen H, Lenstra JA, Achilli A, Lei C. Wang S, et al. Among authors: lenstra ja. Sci Rep. 2017 Jul 5;7(1):4708. doi: 10.1038/s41598-017-04830-2. Sci Rep. 2017. PMID: 28680070 Free PMC article.
Long divergent haplotypes introgressed from wild sheep are associated with distinct morphological and adaptive characteristics in domestic sheep.
Cheng H, Zhang Z, Wen J, Lenstra JA, Heller R, Cai Y, Guo Y, Li M, Li R, Li W, He S, Wang J, Shao J, Song Y, Zhang L, Billah M, Wang X, Liu M, Jiang Y. Cheng H, et al. Among authors: lenstra ja. PLoS Genet. 2023 Feb 23;19(2):e1010615. doi: 10.1371/journal.pgen.1010615. eCollection 2023 Feb. PLoS Genet. 2023. PMID: 36821549 Free PMC article.
Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing.
Chen N, Xia X, Hanif Q, Zhang F, Dang R, Huang B, Lyu Y, Luo X, Zhang H, Yan H, Wang S, Wang F, Chen J, Guan X, Liu Y, Li S, Jin L, Wang P, Sun L, Zhang J, Liu J, Qu K, Cao Y, Sun J, Liao Y, Xiao Z, Cai M, Mu L, Siddiki AZ, Asif M, Mansoor S, Babar ME, Hussain T, Silva GLLP, Gorkhali NA, Terefe E, Belay G, Tijjani A, Zegeye T, Gebre MG, Ma Y, Wang Y, Huang Y, Lan X, Chen H, Migliore NR, Colombo G, Semino O, Achilli A, Sinding MS, Lenstra JA, Cheng H, Lu W, Hanotte O, Han J, Jiang Y, Lei C. Chen N, et al. Among authors: lenstra ja. Nat Commun. 2023 Nov 28;14(1):7803. doi: 10.1038/s41467-023-43626-z. Nat Commun. 2023. PMID: 38016956 Free PMC article.
Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes.
Colli L, Milanesi M, Talenti A, Bertolini F, Chen M, Crisà A, Daly KG, Del Corvo M, Guldbrandtsen B, Lenstra JA, Rosen BD, Vajana E, Catillo G, Joost S, Nicolazzi EL, Rochat E, Rothschild MF, Servin B, Sonstegard TS, Steri R, Van Tassell CP, Ajmone-Marsan P, Crepaldi P, Stella A; AdaptMap Consortium. Colli L, et al. Among authors: lenstra ja. Genet Sel Evol. 2018 Nov 19;50(1):58. doi: 10.1186/s12711-018-0422-x. Genet Sel Evol. 2018. PMID: 30449284 Free PMC article.
Whole-genome resequencing of wild and domestic sheep identifies genes associated with morphological and agronomic traits.
Li X, Yang J, Shen M, Xie XL, Liu GJ, Xu YX, Lv FH, Yang H, Yang YL, Liu CB, Zhou P, Wan PC, Zhang YS, Gao L, Yang JQ, Pi WH, Ren YL, Shen ZQ, Wang F, Deng J, Xu SS, Salehian-Dehkordi H, Hehua E, Esmailizadeh A, Dehghani-Qanatqestani M, Štěpánek O, Weimann C, Erhardt G, Amane A, Mwacharo JM, Han JL, Hanotte O, Lenstra JA, Kantanen J, Coltman DW, Kijas JW, Bruford MW, Periasamy K, Wang XH, Li MH. Li X, et al. Among authors: lenstra ja. Nat Commun. 2020 Jun 4;11(1):2815. doi: 10.1038/s41467-020-16485-1. Nat Commun. 2020. PMID: 32499537 Free PMC article.
Paternal Origins and Migratory Episodes of Domestic Sheep.
Deng J, Xie XL, Wang DF, Zhao C, Lv FH, Li X, Yang J, Yu JL, Shen M, Gao L, Yang JQ, Liu MJ, Li WR, Wang YT, Wang F, Li JQ, Hehua E, Liu YG, Shen ZQ, Ren YL, Liu GJ, Chen ZH, Gorkhali NA, Rushdi HE, Salehian-Dehkordi H, Esmailizadeh A, Nosrati M, Paiva SR, Caetano AR, Štěpánek O, Olsaker I, Weimann C, Erhardt G, Curik I, Kantanen J, Mwacharo JM, Hanotte O, Bruford MW, Ciani E, Periasamy K, Amills M, Lenstra JA, Han JL, Zhang HP, Li L, Li MH. Deng J, et al. Among authors: lenstra ja. Curr Biol. 2020 Oct 19;30(20):4085-4095.e6. doi: 10.1016/j.cub.2020.07.077. Epub 2020 Aug 20. Curr Biol. 2020. PMID: 32822607 Free article.
174 results