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E4F1 and ZNF148 are transcriptional activators of the -57A > C and wild-type TERT promoter.
Genome Res. 2023 Nov 2;33(11):1893-905. doi: 10.1101/gr.277724.123. Online ahead of print.
Genome Res. 2023.
PMID: 37918959
Free PMC article.
Dataset of bulged G-quadruplex forming sequences in the human genome.
Papp C, Jenjaroenpun P, Mukundan VT, Phan AT, Kuznetsov VA.
Papp C, et al. Among authors: mukundan vt.
Data Brief. 2023 Sep 6;50:109550. doi: 10.1016/j.dib.2023.109550. eCollection 2023 Oct.
Data Brief. 2023.
PMID: 37743888
Free PMC article.
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A systems biology approach uncovers novel disease mechanisms in age-related macular degeneration.
Orozco LD, Owen LA, Hofmann J, Stockwell AD, Tao J, Haller S, Mukundan VT, Clarke C, Lund J, Sridhar A, Mayba O, Barr JL, Zavala RA, Graves EC, Zhang C, Husami N, Finley R, Au E, Lillvis JH, Farkas MH, Shakoor A, Sherva R, Kim IK, Kaminker JS, Townsend MJ, Farrer LA, Yaspan BL, Chen HH, DeAngelis MM.
Orozco LD, et al. Among authors: mukundan vt.
Cell Genom. 2023 Apr 18;3(6):100302. doi: 10.1016/j.xgen.2023.100302. eCollection 2023 Jun 14.
Cell Genom. 2023.
PMID: 37388919
Free PMC article.
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Stable bulged G-quadruplexes in the human genome: identification, experimental validation and functionalization.
Papp C, Mukundan VT, Jenjaroenpun P, Winnerdy FR, Ow GS, Phan AT, Kuznetsov VA.
Papp C, et al. Among authors: mukundan vt.
Nucleic Acids Res. 2023 May 22;51(9):4148-4177. doi: 10.1093/nar/gkad252.
Nucleic Acids Res. 2023.
PMID: 37094040
Free PMC article.
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Author Correction: Highly recurrent CBS epimutations in gastric cancer CpG island methylator phenotypes and inflammation.
Padmanabhan N, Kyon HK, Boot A, Lim K, Srivastava S, Chen S, Wu Z, Lee HO, Mukundan VT, Chan C, Chan YK, Xuewen O, Pitt JJ, Isa ZFA, Xing M, Lee MH, Tan ALK, Ting SHW, Luftig MA, Kappei D, Kruger WD, Bian J, Ho YS, Teh M, Rozen SG, Tan P.
Padmanabhan N, et al. Among authors: mukundan vt.
Genome Biol. 2021 Jun 17;22(1):181. doi: 10.1186/s13059-021-02405-z.
Genome Biol. 2021.
PMID: 34140045
Free PMC article.
No abstract available.
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Highly recurrent CBS epimutations in gastric cancer CpG island methylator phenotypes and inflammation.
Padmanabhan N, Kyon HK, Boot A, Lim K, Srivastava S, Chen S, Wu Z, Lee HO, Mukundan VT, Chan C, Chan YK, Xuewen O, Pitt JJ, Isa ZFA, Xing M, Lee MH, Tan ALK, Ting SHW, Luftig MA, Kappei D, Kruger WD, Bian J, Ho YS, Teh M, Rozen SG, Tan P.
Padmanabhan N, et al. Among authors: mukundan vt.
Genome Biol. 2021 Jun 1;22(1):167. doi: 10.1186/s13059-021-02375-2.
Genome Biol. 2021.
PMID: 34074348
Free PMC article.
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Bulges in G-quadruplexes: broadening the definition of G-quadruplex-forming sequences.
Mukundan VT, Phan AT.
Mukundan VT, et al.
J Am Chem Soc. 2013 Apr 3;135(13):5017-28. doi: 10.1021/ja310251r. Epub 2013 Mar 22.
J Am Chem Soc. 2013.
PMID: 23521617
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HIV-1 integrase inhibitor T30177 forms a stacked dimeric G-quadruplex structure containing bulges.
Mukundan VT, Do NQ, Phan AT.
Mukundan VT, et al.
Nucleic Acids Res. 2011 Nov 1;39(20):8984-91. doi: 10.1093/nar/gkr540. Epub 2011 Jul 19.
Nucleic Acids Res. 2011.
PMID: 21771859
Free PMC article.
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