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Intronic small nucleolar RNAs regulate host gene splicing through base pairing with their adjacent intronic sequences.
Bergeron D, Faucher-Giguère L, Emmerichs AK, Choquet K, Song KS, Deschamps-Francoeur G, Fafard-Couture É, Rivera A, Couture S, Churchman LS, Heyd F, Abou Elela S, Scott MS. Bergeron D, et al. Among authors: deschamps francoeur g. Genome Biol. 2023 Jul 6;24(1):160. doi: 10.1186/s13059-023-03002-y. Genome Biol. 2023. PMID: 37415181 Free PMC article.
Protein coding genes as hosts for noncoding RNA expression.
Boivin V, Deschamps-Francoeur G, Scott MS. Boivin V, et al. Semin Cell Dev Biol. 2018 Mar;75:3-12. doi: 10.1016/j.semcdb.2017.08.016. Epub 2017 Aug 12. Semin Cell Dev Biol. 2018. PMID: 28811264 Free article. Review.
snoDB: an interactive database of human snoRNA sequences, abundance and interactions.
Bouchard-Bourelle P, Desjardins-Henri C, Mathurin-St-Pierre D, Deschamps-Francoeur G, Fafard-Couture É, Garant JM, Elela SA, Scott MS. Bouchard-Bourelle P, et al. Among authors: deschamps francoeur g. Nucleic Acids Res. 2020 Jan 8;48(D1):D220-D225. doi: 10.1093/nar/gkz884. Nucleic Acids Res. 2020. PMID: 31598696 Free PMC article.
Handling multi-mapped reads in RNA-seq.
Deschamps-Francoeur G, Simoneau J, Scott MS. Deschamps-Francoeur G, et al. Comput Struct Biotechnol J. 2020 Jun 12;18:1569-1576. doi: 10.1016/j.csbj.2020.06.014. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32637053 Free PMC article. Review.
13 results