Kondev J - Search Results

1

RNA polymerase sliding on DNA can couple the transcription of nearby bacterial operons.

Tenenbaum D, Inlow K, Friedman LJ, Cai A, Gelles J, Kondev J. Tenenbaum D, et al. Among authors: kondev j. Proc Natl Acad Sci U S A. 2023 Jul 25;120(30):e2301402120. doi: 10.1073/pnas.2301402120. Epub 2023 Jul 17. Proc Natl Acad Sci U S A. 2023. PMID: 37459525 Free PMC article.

2

Landau-like theory of glassy dynamics.

Majumdar SN, Das D, Kondev J, Chakraborty B. Majumdar SN, et al. Among authors: kondev j. Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Dec;70(6 Pt 1):060501. doi: 10.1103/PhysRevE.70.060501. Epub 2004 Dec 20. Phys Rev E Stat Nonlin Soft Matter Phys. 2004. PMID: 15697333

3

Critical dynamics of dimers: implications for the glass transition.

Das D, Farrell G, Kondev J, Chakraborty B. Das D, et al. Among authors: kondev j. J Phys Chem B. 2005 Nov 17;109(45):21413-8. doi: 10.1021/jp051636l. J Phys Chem B. 2005. PMID: 16853778

4

Continuous melting of compact polymers.

Jacobsen JL, Kondev J. Jacobsen JL, et al. Among authors: kondev j. Phys Rev Lett. 2004 May 28;92(21):210601. doi: 10.1103/PhysRevLett.92.210601. Epub 2004 May 28. Phys Rev Lett. 2004. PMID: 15245269

5

Transcriptional control of noise in gene expression.

Sánchez A, Kondev J. Sánchez A, et al. Among authors: kondev j. Proc Natl Acad Sci U S A. 2008 Apr 1;105(13):5081-6. doi: 10.1073/pnas.0707904105. Epub 2008 Mar 19. Proc Natl Acad Sci U S A. 2008. PMID: 18353986 Free PMC article.

6

Strong intranucleoid interactions organize the Escherichia coli chromosome into a nucleoid filament.

Wiggins PA, Cheveralls KC, Martin JS, Lintner R, Kondev J. Wiggins PA, et al. Among authors: kondev j. Proc Natl Acad Sci U S A. 2010 Mar 16;107(11):4991-5. doi: 10.1073/pnas.0912062107. Epub 2010 Mar 1. Proc Natl Acad Sci U S A. 2010. PMID: 20194778 Free PMC article.

7

Mechanism of transcriptional repression at a bacterial promoter by analysis of single molecules.

Sanchez A, Osborne ML, Friedman LJ, Kondev J, Gelles J. Sanchez A, et al. Among authors: kondev j. EMBO J. 2011 Aug 9;30(19):3940-6. doi: 10.1038/emboj.2011.273. EMBO J. 2011. PMID: 21829165 Free PMC article.

8

Operator sequence alters gene expression independently of transcription factor occupancy in bacteria.

Garcia HG, Sanchez A, Boedicker JQ, Osborne M, Gelles J, Kondev J, Phillips R. Garcia HG, et al. Among authors: kondev j. Cell Rep. 2012 Jul 26;2(1):150-61. doi: 10.1016/j.celrep.2012.06.004. Epub 2012 Jul 12. Cell Rep. 2012. PMID: 22840405 Free PMC article.

9

A general mechanism for competitor-induced dissociation of molecular complexes.

Paramanathan T, Reeves D, Friedman LJ, Kondev J, Gelles J. Paramanathan T, et al. Among authors: kondev j. Nat Commun. 2014 Oct 24;5:5207. doi: 10.1038/ncomms6207. Nat Commun. 2014. PMID: 25342513 Free PMC article.

10

Deciphering Transcriptional Dynamics In Vivo by Counting Nascent RNA Molecules.

Choubey S, Kondev J, Sanchez A. Choubey S, et al. Among authors: kondev j. PLoS Comput Biol. 2015 Nov 6;11(11):e1004345. doi: 10.1371/journal.pcbi.1004345. eCollection 2015 Nov. PLoS Comput Biol. 2015. PMID: 26544860 Free PMC article.

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