Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

71 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Protein target highlights in CASP15: Analysis of models by structure providers.
Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, Breyton C, Caulton SG, Chen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, Grimes JM, Grinter R, Gurusaran M, Hartmann MD, Hitchman CJ, Keown JR, Kropp A, Kursula P, Lovering AL, Lemaitre B, Lia A, Liu S, Logotheti M, Lu S, Markússon S, Miller MD, Minasov G, Niemann HH, Opazo F, Phillips GN Jr, Davies OR, Rommelaere S, Rosas-Lemus M, Roversi P, Satchell K, Smith N, Wilson MA, Wu KL, Xia X, Xiao H, Zhang W, Zhou ZH, Fidelis K, Topf M, Moult J, Schwede T. Alexander LT, et al. Among authors: hartmann md. Proteins. 2023 Dec;91(12):1571-1599. doi: 10.1002/prot.26545. Epub 2023 Jul 26. Proteins. 2023. PMID: 37493353 Free PMC article.
Some of the most interesting CASP11 targets through the eyes of their authors.
Kryshtafovych A, Moult J, Baslé A, Burgin A, Craig TK, Edwards RA, Fass D, Hartmann MD, Korycinski M, Lewis RJ, Lorimer D, Lupas AN, Newman J, Peat TS, Piepenbrink KH, Prahlad J, van Raaij MJ, Rohwer F, Segall AM, Seguritan V, Sundberg EJ, Singh AK, Wilson MA, Schwede T. Kryshtafovych A, et al. Among authors: hartmann md. Proteins. 2016 Sep;84 Suppl 1(Suppl Suppl 1):34-50. doi: 10.1002/prot.24942. Epub 2015 Nov 16. Proteins. 2016. PMID: 26473983 Free PMC article.
Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016).
Kryshtafovych A, Albrecht R, Baslé A, Bule P, Caputo AT, Carvalho AL, Chao KL, Diskin R, Fidelis K, Fontes CMGA, Fredslund F, Gilbert HJ, Goulding CW, Hartmann MD, Hayes CS, Herzberg O, Hill JC, Joachimiak A, Kohring GW, Koning RI, Lo Leggio L, Mangiagalli M, Michalska K, Moult J, Najmudin S, Nardini M, Nardone V, Ndeh D, Nguyen TH, Pintacuda G, Postel S, van Raaij MJ, Roversi P, Shimon A, Singh AK, Sundberg EJ, Tars K, Zitzmann N, Schwede T. Kryshtafovych A, et al. Among authors: hartmann md. Proteins. 2018 Mar;86 Suppl 1(Suppl 1):27-50. doi: 10.1002/prot.25392. Epub 2017 Oct 16. Proteins. 2018. PMID: 28960539 Free PMC article.
Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Lepore R, Kryshtafovych A, Alahuhta M, Veraszto HA, Bomble YJ, Bufton JC, Bullock AN, Caba C, Cao H, Davies OR, Desfosses A, Dunne M, Fidelis K, Goulding CW, Gurusaran M, Gutsche I, Harding CJ, Hartmann MD, Hayes CS, Joachimiak A, Leiman PG, Loppnau P, Lovering AL, Lunin VV, Michalska K, Mir-Sanchis I, Mitra AK, Moult J, Phillips GN Jr, Pinkas DM, Rice PA, Tong Y, Topf M, Walton JD, Schwede T. Lepore R, et al. Among authors: hartmann md. Proteins. 2019 Dec;87(12):1037-1057. doi: 10.1002/prot.25805. Epub 2019 Sep 9. Proteins. 2019. PMID: 31442339 Free PMC article.
High-accuracy protein structure prediction in CASP14.
Pereira J, Simpkin AJ, Hartmann MD, Rigden DJ, Keegan RM, Lupas AN. Pereira J, et al. Among authors: hartmann md. Proteins. 2021 Dec;89(12):1687-1699. doi: 10.1002/prot.26171. Epub 2021 Jul 14. Proteins. 2021. PMID: 34218458
Computational models in the service of X-ray and cryo-electron microscopy structure determination.
Kryshtafovych A, Moult J, Albrecht R, Chang GA, Chao K, Fraser A, Greenfield J, Hartmann MD, Herzberg O, Josts I, Leiman PG, Linden SB, Lupas AN, Nelson DC, Rees SD, Shang X, Sokolova ML, Tidow H; AlphaFold2 team. Kryshtafovych A, et al. Among authors: hartmann md. Proteins. 2021 Dec;89(12):1633-1646. doi: 10.1002/prot.26223. Epub 2021 Sep 6. Proteins. 2021. PMID: 34449113 Free PMC article.
Target highlights in CASP14: Analysis of models by structure providers.
Alexander LT, Lepore R, Kryshtafovych A, Adamopoulos A, Alahuhta M, Arvin AM, Bomble YJ, Böttcher B, Breyton C, Chiarini V, Chinnam NB, Chiu W, Fidelis K, Grinter R, Gupta GD, Hartmann MD, Hayes CS, Heidebrecht T, Ilari A, Joachimiak A, Kim Y, Linares R, Lovering AL, Lunin VV, Lupas AN, Makbul C, Michalska K, Moult J, Mukherjee PK, Nutt WS, Oliver SL, Perrakis A, Stols L, Tainer JA, Topf M, Tsutakawa SE, Valdivia-Delgado M, Schwede T. Alexander LT, et al. Among authors: hartmann md. Proteins. 2021 Dec;89(12):1647-1672. doi: 10.1002/prot.26247. Epub 2021 Oct 10. Proteins. 2021. PMID: 34561912 Free PMC article.
Assessing the utility of CASP14 models for molecular replacement.
Millán C, Keegan RM, Pereira J, Sammito MD, Simpkin AJ, McCoy AJ, Lupas AN, Hartmann MD, Rigden DJ, Read RJ. Millán C, et al. Among authors: hartmann md. Proteins. 2021 Dec;89(12):1752-1769. doi: 10.1002/prot.26214. Epub 2021 Aug 21. Proteins. 2021. PMID: 34387010 Free PMC article.
The breakthrough in protein structure prediction.
Lupas AN, Pereira J, Alva V, Merino F, Coles M, Hartmann MD. Lupas AN, et al. Among authors: hartmann md. Biochem J. 2021 May 28;478(10):1885-1890. doi: 10.1042/BCJ20200963. Biochem J. 2021. PMID: 34029366 Free PMC article.
71 results