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The All of Us Data and Research Center: Creating a Secure, Scalable, and Sustainable Ecosystem for Biomedical Research.
Mayo KR, Basford MA, Carroll RJ, Dillon M, Fullen H, Leung J, Master H, Rura S, Sulieman L, Kennedy N, Banks E, Bernick D, Gauchan A, Lichtenstein L, Mapes BM, Marginean K, Nyemba SL, Ramirez A, Rotundo C, Wolfe K, Xia W, Azuine RE, Cronin RM, Denny JC, Kho A, Lunt C, Malin B, Natarajan K, Wilkins CH, Xu H, Hripcsak G, Roden DM, Philippakis AA, Glazer D, Harris PA. Mayo KR, et al. Among authors: philippakis aa. Annu Rev Biomed Data Sci. 2023 Aug 10;6:443-464. doi: 10.1146/annurev-biodatasci-122120-104825. Annu Rev Biomed Data Sci. 2023. PMID: 37561600 Free article. Review.
Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research.
Ahalt S, Avillach P, Boyles R, Bradford K, Cox S, Davis-Dusenbery B, Grossman RL, Krishnamurthy A, Manning A, Paten B, Philippakis A, Borecki I, Chen SH, Kaltman J, Ladwa S, Schwartz C, Thomson A, Davis S, Leaf A, Lyons J, Sheets E, Bis JC, Conomos M, Culotti A, Desain T, Digiovanna J, Domazet M, Gogarten S, Gutierrez-Sacristan A, Harris T, Heavner B, Jain D, O'Connor B, Osborn K, Pillion D, Pleiness J, Rice K, Rupp G, Serret-Larmande A, Smith A, Stedman JP, Stilp A, Barsanti T, Cheadle J, Erdmann C, Farlow B, Gartland-Gray A, Hayes J, Hiles H, Kerr P, Lenhardt C, Madden T, Mieczkowska JO, Miller A, Patton P, Rathbun M, Suber S, Asare J. Ahalt S, et al. J Am Med Inform Assoc. 2023 Jun 20;30(7):1293-1300. doi: 10.1093/jamia/ocad048. J Am Med Inform Assoc. 2023. PMID: 37192819 Free PMC article.
Deep learning of left atrial structure and function provides link to atrial fibrillation risk.
Pirruccello JP, Di Achille P, Choi SH, Rämö JT, Khurshid S, Nekoui M, Jurgens SJ, Nauffal V, Kany S; FinnGen; Ng K, Friedman SF, Batra P, Lunetta KL, Palotie A, Philippakis AA, Ho JE, Lubitz SA, Ellinor PT. Pirruccello JP, et al. Among authors: philippakis aa. Nat Commun. 2024 May 21;15(1):4304. doi: 10.1038/s41467-024-48229-w. Nat Commun. 2024. PMID: 38773065 Free PMC article.
Demonstrating paths for unlocking the value of cloud genomics through cross cohort analysis.
Deflaux N, Selvaraj MS, Condon HR, Mayo K, Haidermota S, Basford MA, Lunt C, Philippakis AA, Roden DM, Denny JC, Musick A, Collins R, Allen N, Effingham M, Glazer D, Natarajan P, Bick AG. Deflaux N, et al. Among authors: philippakis aa. Nat Commun. 2023 Sep 5;14(1):5419. doi: 10.1038/s41467-023-41185-x. Nat Commun. 2023. PMID: 37669985 Free PMC article.
A framework for individualized splice-switching oligonucleotide therapy.
Kim J, Woo S, de Gusmao CM, Zhao B, Chin DH, DiDonato RL, Nguyen MA, Nakayama T, Hu CA, Soucy A, Kuniholm A, Thornton JK, Riccardi O, Friedman DA, El Achkar CM, Dash Z, Cornelissen L, Donado C, Faour KNW, Bush LW, Suslovitch V, Lentucci C, Park PJ, Lee EA, Patterson A, Philippakis AA, Margus B, Berde CB, Yu TW. Kim J, et al. Among authors: philippakis aa. Nature. 2023 Jul;619(7971):828-836. doi: 10.1038/s41586-023-06277-0. Epub 2023 Jul 12. Nature. 2023. PMID: 37438524 Free PMC article.
High-throughput RNA isoform sequencing using programmed cDNA concatenation.
Al'Khafaji AM, Smith JT, Garimella KV, Babadi M, Popic V, Sade-Feldman M, Gatzen M, Sarkizova S, Schwartz MA, Blaum EM, Day A, Costello M, Bowers T, Gabriel S, Banks E, Philippakis AA, Boland GM, Blainey PC, Hacohen N. Al'Khafaji AM, et al. Among authors: philippakis aa. Nat Biotechnol. 2024 Apr;42(4):582-586. doi: 10.1038/s41587-023-01815-7. Epub 2023 Jun 8. Nat Biotechnol. 2024. PMID: 37291427
59 results