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Neural ADMIXTURE for rapid genomic clustering.
Mantes AD, Montserrat DM, Bustamante CD, Giró-I-Nieto X, Ioannidis AG. Mantes AD, et al. Among authors: giro i nieto x. Nat Comput Sci. 2023 Jul;3(7):621-629. doi: 10.1038/s43588-023-00482-7. Epub 2023 Jul 6. Nat Comput Sci. 2023. PMID: 37600116 Free PMC article.
The Liver Tumor Segmentation Benchmark (LiTS).
Bilic P, Christ P, Li HB, Vorontsov E, Ben-Cohen A, Kaissis G, Szeskin A, Jacobs C, Mamani GEH, Chartrand G, Lohöfer F, Holch JW, Sommer W, Hofmann F, Hostettler A, Lev-Cohain N, Drozdzal M, Amitai MM, Vivanti R, Sosna J, Ezhov I, Sekuboyina A, Navarro F, Kofler F, Paetzold JC, Shit S, Hu X, Lipková J, Rempfler M, Piraud M, Kirschke J, Wiestler B, Zhang Z, Hülsemeyer C, Beetz M, Ettlinger F, Antonelli M, Bae W, Bellver M, Bi L, Chen H, Chlebus G, Dam EB, Dou Q, Fu CW, Georgescu B, Giró-I-Nieto X, Gruen F, Han X, Heng PA, Hesser J, Moltz JH, Igel C, Isensee F, Jäger P, Jia F, Kaluva KC, Khened M, Kim I, Kim JH, Kim S, Kohl S, Konopczynski T, Kori A, Krishnamurthi G, Li F, Li H, Li J, Li X, Lowengrub J, Ma J, Maier-Hein K, Maninis KK, Meine H, Merhof D, Pai A, Perslev M, Petersen J, Pont-Tuset J, Qi J, Qi X, Rippel O, Roth K, Sarasua I, Schenk A, Shen Z, Torres J, Wachinger C, Wang C, Weninger L, Wu J, Xu D, Yang X, Yu SC, Yuan Y, Yue M, Zhang L, Cardoso J, Bakas S, Braren R, Heinemann V, Pal C, Tang A, Kadoury S, Soler L, van Ginneken B, Greenspan H, Joskowicz L, Menze B. Bilic P, et al. Among authors: giro i nieto x. Med Image Anal. 2023 Feb;84:102680. doi: 10.1016/j.media.2022.102680. Epub 2022 Nov 17. Med Image Anal. 2023. PMID: 36481607 Free PMC article.
SALAI-Net: species-agnostic local ancestry inference network.
Oriol Sabat B, Mas Montserrat D, Giro-I-Nieto X, Ioannidis AG. Oriol Sabat B, et al. Among authors: giro i nieto x. Bioinformatics. 2022 Sep 16;38(Suppl_2):ii27-ii33. doi: 10.1093/bioinformatics/btac464. Bioinformatics. 2022. PMID: 36124792 Free PMC article.
Generative Moment Matching Networks for Genotype Simulation.
Perera M, Montserrat DM, Barrabes M, Geleta M, Giro-I-Nieto X, Ioannidis AG. Perera M, et al. Among authors: giro i nieto x. Annu Int Conf IEEE Eng Med Biol Soc. 2022 Jul;2022:1379-1383. doi: 10.1109/EMBC48229.2022.9871045. Annu Int Conf IEEE Eng Med Biol Soc. 2022. PMID: 36086656
Predicting Dog Phenotypes from Genotypes.
Bartusiak ER, Barrabes M, Rymbekova A, Gimbernat-Mayol J, Lopez C, Barberis L, Montserrat DM, Giro-I-Nieto X, Ioannidis AG. Bartusiak ER, et al. Among authors: giro i nieto x. Annu Int Conf IEEE Eng Med Biol Soc. 2022 Jul;2022:3558-3562. doi: 10.1109/EMBC48229.2022.9870905. Annu Int Conf IEEE Eng Med Biol Soc. 2022. PMID: 36085664