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Genomes of historical specimens reveal multiple invasions of LTR retrotransposons in Drosophila melanogaster during the 19th century.
Proc Natl Acad Sci U S A. 2024 Apr 9;121(15):e2313866121. doi: 10.1073/pnas.2313866121. Epub 2024 Apr 2.
Proc Natl Acad Sci U S A. 2024.
PMID: 38564639
Free PMC article.
Experimentally evolving Drosophila erecta populations may fail to establish an effective piRNA-based host defense against invading P-elements.
Selvaraju D, Wierzbicki F, Kofler R.
Selvaraju D, et al. Among authors: wierzbicki f.
Genome Res. 2024 Apr 25;34(3):410-425. doi: 10.1101/gr.278706.123.
Genome Res. 2024.
PMID: 38490738
Free PMC article.
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The composition of piRNA clusters in Drosophila melanogaster deviates from expectations under the trap model.
Wierzbicki F, Kofler R.
Wierzbicki F, et al.
BMC Biol. 2023 Oct 20;21(1):224. doi: 10.1186/s12915-023-01727-7.
BMC Biol. 2023.
PMID: 37858221
Free PMC article.
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Rapid evolutionary diversification of the flamenco locus across simulans clade Drosophila species.
Signor S, Vedanayagam J, Kim BY, Wierzbicki F, Kofler R, Lai EC.
Signor S, et al. Among authors: wierzbicki f.
PLoS Genet. 2023 Aug 29;19(8):e1010914. doi: 10.1371/journal.pgen.1010914. eCollection 2023 Aug.
PLoS Genet. 2023.
PMID: 37643184
Free PMC article.
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Evolutionary dynamics of piRNA clusters in Drosophila.
Wierzbicki F, Kofler R, Signor S.
Wierzbicki F, et al.
Mol Ecol. 2023 Mar;32(6):1306-1322. doi: 10.1111/mec.16311. Epub 2021 Dec 16.
Mol Ecol. 2023.
PMID: 34878692
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Novel quality metrics allow identifying and generating high-quality assemblies of piRNA clusters.
Wierzbicki F, Schwarz F, Cannalonga O, Kofler R.
Wierzbicki F, et al.
Mol Ecol Resour. 2022 Jan;22(1):102-121. doi: 10.1111/1755-0998.13455. Epub 2021 Aug 28.
Mol Ecol Resour. 2022.
PMID: 34181811
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Tirant Stealthily Invaded Natural Drosophila melanogaster Populations during the Last Century.
Schwarz F, Wierzbicki F, Senti KA, Kofler R.
Schwarz F, et al. Among authors: wierzbicki f.
Mol Biol Evol. 2021 Apr 13;38(4):1482-1497. doi: 10.1093/molbev/msaa308.
Mol Biol Evol. 2021.
PMID: 33247725
Free PMC article.
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