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99 results

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Page 1
Mapping human tissues with highly multiplexed RNA in situ hybridization.
Kalhor K, Chen CJ, Lee HS, Cai M, Nafisi M, Que R, Palmer CR, Yuan Y, Zhang Y, Li X, Song J, Knoten A, Lake BB, Gaut JP, Keene CD, Lein E, Kharchenko PV, Chun J, Jain S, Fan JB, Zhang K. Kalhor K, et al. Among authors: kharchenko pv. Nat Commun. 2024 Mar 20;15(1):2511. doi: 10.1038/s41467-024-46437-y. Nat Commun. 2024. PMID: 38509069 Free PMC article.
Single-cell analyses of metastatic bone marrow in human neuroblastoma reveals microenvironmental remodeling and metastatic signature.
Mei S, Alchahin AM, Embaie BT, Gavriliuc IM, Verhoeven BM, Zhao T, Li X, Jeffries NE, Pepich A, Sarkar H, Olsen TK, Wickström M, Stenman J, Reina-Bedoya O, Kharchenko PV, Saylor PJ, Johnsen JI, Sykes DB, Kogner P, Baryawno N. Mei S, et al. Among authors: kharchenko pv. JCI Insight. 2024 Feb 15;9(6):e173337. doi: 10.1172/jci.insight.173337. JCI Insight. 2024. PMID: 38358826 Free PMC article.
Single-cell analysis of immune and stroma cell remodeling in clear cell renal cell carcinoma primary tumors and bone metastatic lesions.
Mei S, Alchahin AM, Tsea I, Kfoury Y, Hirz T, Jeffries NE, Zhao T, Xu Y, Zhang H, Sarkar H, Wu S, Subtelny AO, Johnsen JI, Zhang Y, Salari K, Wu CL, Randolph MA, Scadden DT, Dahl DM, Shin J, Kharchenko PV, Saylor PJ, Sykes DB, Baryawno N. Mei S, et al. Among authors: kharchenko pv. Genome Med. 2024 Jan 29;16(1):1. doi: 10.1186/s13073-023-01272-6. Genome Med. 2024. PMID: 38281962 Free PMC article.
Gene panel selection for targeted spatial transcriptomics.
Zhang Y, Petukhov V, Biederstedt E, Que R, Zhang K, Kharchenko PV. Zhang Y, et al. Among authors: kharchenko pv. Genome Biol. 2024 Jan 25;25(1):35. doi: 10.1186/s13059-024-03174-1. Genome Biol. 2024. PMID: 38273415 Free PMC article.
A pan-tissue survey of mosaic chromosomal alterations in 948 individuals.
Gao T, Kastriti ME, Ljungström V, Heinzel A, Tischler AS, Oberbauer R, Loh PR, Adameyko I, Park PJ, Kharchenko PV. Gao T, et al. Among authors: kharchenko pv. Nat Genet. 2023 Nov;55(11):1901-1911. doi: 10.1038/s41588-023-01537-1. Epub 2023 Oct 30. Nat Genet. 2023. PMID: 37904053 Free PMC article.
Mapping Human Tissues with Highly Multiplexed RNA in situ Hybridization.
Kalhor K, Chen CJ, Lee HS, Cai M, Nafisi M, Que R, Palmer C, Yuan Y, Zhang Y, Song J, Knoten A, Lake BB, Gaut JP, Keene D, Lein E, Kharchenko PV, Chun J, Jain S, Fan JB, Zhang K. Kalhor K, et al. Among authors: kharchenko pv. bioRxiv [Preprint]. 2023 Aug 19:2023.08.16.553610. doi: 10.1101/2023.08.16.553610. bioRxiv. 2023. PMID: 37645998 Free PMC article. Updated. Preprint.
An atlas of healthy and injured cell states and niches in the human kidney.
Lake BB, Menon R, Winfree S, Hu Q, Melo Ferreira R, Kalhor K, Barwinska D, Otto EA, Ferkowicz M, Diep D, Plongthongkum N, Knoten A, Urata S, Mariani LH, Naik AS, Eddy S, Zhang B, Wu Y, Salamon D, Williams JC, Wang X, Balderrama KS, Hoover PJ, Murray E, Marshall JL, Noel T, Vijayan A, Hartman A, Chen F, Waikar SS, Rosas SE, Wilson FP, Palevsky PM, Kiryluk K, Sedor JR, Toto RD, Parikh CR, Kim EH, Satija R, Greka A, Macosko EZ, Kharchenko PV, Gaut JP, Hodgin JB; KPMP Consortium; Eadon MT, Dagher PC, El-Achkar TM, Zhang K, Kretzler M, Jain S. Lake BB, et al. Among authors: kharchenko pv. Nature. 2023 Jul;619(7970):585-594. doi: 10.1038/s41586-023-05769-3. Epub 2023 Jul 19. Nature. 2023. PMID: 37468583 Free PMC article.
Gene panel selection for targeted spatial transcriptomics.
Zhang Y, Petukhov V, Biederstedt E, Que R, Zhang K, Kharchenko PV. Zhang Y, et al. Among authors: kharchenko pv. bioRxiv [Preprint]. 2023 Mar 24:2023.02.03.527053. doi: 10.1101/2023.02.03.527053. bioRxiv. 2023. PMID: 36993340 Free PMC article. Updated. Preprint.
Dissecting the immune suppressive human prostate tumor microenvironment via integrated single-cell and spatial transcriptomic analyses.
Hirz T, Mei S, Sarkar H, Kfoury Y, Wu S, Verhoeven BM, Subtelny AO, Zlatev DV, Wszolek MW, Salari K, Murray E, Chen F, Macosko EZ, Wu CL, Scadden DT, Dahl DM, Baryawno N, Saylor PJ, Kharchenko PV, Sykes DB. Hirz T, et al. Among authors: kharchenko pv. Nat Commun. 2023 Feb 7;14(1):663. doi: 10.1038/s41467-023-36325-2. Nat Commun. 2023. PMID: 36750562 Free PMC article.
99 results