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Predicting pseudoknotted structures across two RNA sequences.
Sperschneider J, Datta A, Wise MJ. Sperschneider J, et al. Bioinformatics. 2012 Dec 1;28(23):3058-65. doi: 10.1093/bioinformatics/bts575. Epub 2012 Oct 8. Bioinformatics. 2012. PMID: 23044552 Free PMC article.
Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat.
Chen J, Upadhyaya NM, Ortiz D, Sperschneider J, Li F, Bouton C, Breen S, Dong C, Xu B, Zhang X, Mago R, Newell K, Xia X, Bernoux M, Taylor JM, Steffenson B, Jin Y, Zhang P, Kanyuka K, Figueroa M, Ellis JG, Park RF, Dodds PN. Chen J, et al. Among authors: sperschneider j. Science. 2017 Dec 22;358(6370):1607-1610. doi: 10.1126/science.aao4810. Science. 2017. PMID: 29269475
De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust.
Miller ME, Zhang Y, Omidvar V, Sperschneider J, Schwessinger B, Raley C, Palmer JM, Garnica D, Upadhyaya N, Rathjen J, Taylor JM, Park RF, Dodds PN, Hirsch CD, Kianian SF, Figueroa M. Miller ME, et al. Among authors: sperschneider j. mBio. 2018 Feb 20;9(1):e01650-17. doi: 10.1128/mBio.01650-17. mBio. 2018. PMID: 29463655 Free PMC article.
Comparative genomics of Australian isolates of the wheat stem rust pathogen Puccinia graminis f. sp. tritici reveals extensive polymorphism in candidate effector genes.
Upadhyaya NM, Garnica DP, Karaoglu H, Sperschneider J, Nemri A, Xu B, Mago R, Cuomo CA, Rathjen JP, Park RF, Ellis JG, Dodds PN. Upadhyaya NM, et al. Among authors: sperschneider j. Front Plant Sci. 2015 Jan 8;5:759. doi: 10.3389/fpls.2014.00759. eCollection 2014. Front Plant Sci. 2015. PMID: 25620970 Free PMC article.
48 results