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CyTOFmerge: integrating mass cytometry data across multiple panels.
Abdelaal T, Höllt T, van Unen V, Lelieveldt BPF, Koning F, Reinders MJT, Mahfouz A. Abdelaal T, et al. Bioinformatics. 2019 Oct 15;35(20):4063-4071. doi: 10.1093/bioinformatics/btz180. Bioinformatics. 2019. PMID: 30874801 Free PMC article.
Predicting Cell Populations in Single Cell Mass Cytometry Data.
Abdelaal T, van Unen V, Höllt T, Koning F, Reinders MJT, Mahfouz A. Abdelaal T, et al. Cytometry A. 2019 Jul;95(7):769-781. doi: 10.1002/cyto.a.23738. Epub 2019 Mar 12. Cytometry A. 2019. PMID: 30861637 Free PMC article.
scTopoGAN: unsupervised manifold alignment of single-cell data.
Singh A, Biharie K, Reinders MJT, Mahfouz A, Abdelaal T. Singh A, et al. Among authors: abdelaal t. Bioinform Adv. 2023 Nov 24;3(1):vbad171. doi: 10.1093/bioadv/vbad171. eCollection 2023. Bioinform Adv. 2023. PMID: 38075479 Free PMC article.
SpaGE: Spatial Gene Enhancement using scRNA-seq.
Abdelaal T, Mourragui S, Mahfouz A, Reinders MJT. Abdelaal T, et al. Nucleic Acids Res. 2020 Oct 9;48(18):e107. doi: 10.1093/nar/gkaa740. Nucleic Acids Res. 2020. PMID: 32955565 Free PMC article.
OX40 agonism enhances PD-L1 checkpoint blockade by shifting the cytotoxic T cell differentiation spectrum.
van der Sluis TC, Beyrend G, van der Gracht ETI, Abdelaal T, Jochems SP, Belderbos RA, Wesselink TH, van Duikeren S, van Haften FJ, Redeker A, Ouboter LF, Beyranvand Nejad E, Camps M, Franken KLMC, Linssen MM, Hohenstein P, de Miranda NFCC, Mei H, Bins AD, Haanen JBAG, Aerts JG, Ossendorp F, Arens R. van der Sluis TC, et al. Among authors: abdelaal t. Cell Rep Med. 2023 Mar 21;4(3):100939. doi: 10.1016/j.xcrm.2023.100939. Epub 2023 Feb 15. Cell Rep Med. 2023. PMID: 36796366 Free PMC article.
43 results