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Machine learning links T cell function and spatial localization to neoadjuvant immunotherapy and clinical outcome in pancreatic cancer.
bioRxiv [Preprint]. 2023 Oct 23:2023.10.20.563335. doi: 10.1101/2023.10.20.563335.
bioRxiv. 2023.
PMID: 37961410
Free PMC article.
Updated.
Preprint.
MYC Deregulation and PTEN Loss Model Tumor and Stromal Heterogeneity of Aggressive Triple-Negative Breast Cancer.
Doha ZO, Wang X, Calistri NL, Eng J, Daniel CJ, Ternes L, Kim EN, Pelz C, Munks M, Betts C, Kwon S, Bucher E, Li X, Waugh T, Tatarova Z, Blumberg D, Ko A, Kirchberger N, Pietenpol JA, Sanders ME, Langer EM, Dai MS, Mills G, Chin K, Chang YH, Coussens LM, Gray JW, Heiser LM, Sears RC.
Doha ZO, et al. Among authors: kirchberger n.
Nat Commun. 2023 Sep 13;14(1):5665. doi: 10.1038/s41467-023-40841-6.
Nat Commun. 2023.
PMID: 37704631
Free PMC article.
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Machine Learning Links T-cell Function and Spatial Localization to Neoadjuvant Immunotherapy and Clinical Outcome in Pancreatic Cancer.
Blise KE, Sivagnanam S, Betts CB, Betre K, Kirchberger N, Tate BJ, Furth EE, Dias Costa A, Nowak JA, Wolpin BM, Vonderheide RH, Goecks J, Coussens LM, Byrne KT.
Blise KE, et al. Among authors: kirchberger n.
Cancer Immunol Res. 2024 May 2;12(5):544-558. doi: 10.1158/2326-6066.CIR-23-0873.
Cancer Immunol Res. 2024.
PMID: 38381401
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The MEMIC is an ex vivo system to model the complexity of the tumor microenvironment.
Janská L, Anandi L, Kirchberger NC, Marinkovic ZS, Schachtner LT, Guzelsoy G, Carmona-Fontaine C.
Janská L, et al. Among authors: kirchberger nc.
Dis Model Mech. 2021 Aug 1;14(8):dmm048942. doi: 10.1242/dmm.048942. Epub 2021 Aug 18.
Dis Model Mech. 2021.
PMID: 34407185
Free PMC article.
Item in Clipboard
Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics.
Afshinnekoo E, Meydan C, Chowdhury S, Jaroudi D, Boyer C, Bernstein N, Maritz JM, Reeves D, Gandara J, Chhangawala S, Ahsanuddin S, Simmons A, Nessel T, Sundaresh B, Pereira E, Jorgensen E, Kolokotronis SO, Kirchberger N, Garcia I, Gandara D, Dhanraj S, Nawrin T, Saletore Y, Alexander N, Vijay P, Hénaff EM, Zumbo P, Walsh M, O'Mullan GD, Tighe S, Dudley JT, Dunaif A, Ennis S, O'Halloran E, Magalhaes TR, Boone B, Jones AL, Muth TR, Paolantonio KS, Alter E, Schadt EE, Garbarino J, Prill RJ, Carlton JM, Levy S, Mason CE.
Afshinnekoo E, et al. Among authors: kirchberger n.
Cell Syst. 2015 Jul 29;1(1):97-97.e3. doi: 10.1016/j.cels.2015.07.006. Epub 2015 Jul 29.
Cell Syst. 2015.
PMID: 27135689
Free article.
No abstract available.
Item in Clipboard
Modern Methods for Delineating Metagenomic Complexity.
Afshinnekoo E, Meydan C, Chowdhury S, Jaroudi D, Boyer C, Bernstein N, Maritz JM, Reeves D, Gandara J, Chhangawala S, Ahsanuddin S, Simmons A, Nessel T, Sundaresh B, Pereira E, Jorgensen E, Kolokotronis SO, Kirchberger N, Garcia I, Gandara D, Dhanraj S, Nawrin T, Saletore Y, Alexander N, Vijay P, Hénaff EM, Zumbo P, Walsh M, O'Mullan GD, Tighe S, Dudley JT, Dunaif A, Ennis S, O'Halloran E, Magalhaes TR, Boone B, Jones AL, Muth TR, Paolantonio KS, Alter E, Schadt EE, Garbarino J, Prill RJ, Carlton JM, Levy S, Mason CE.
Afshinnekoo E, et al. Among authors: kirchberger n.
Cell Syst. 2015 Jul 29;1(1):6-7. doi: 10.1016/j.cels.2015.07.007. Epub 2015 Jul 29.
Cell Syst. 2015.
PMID: 27135684
Free article.
No abstract available.
Item in Clipboard
Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics.
Afshinnekoo E, Meydan C, Chowdhury S, Jaroudi D, Boyer C, Bernstein N, Maritz JM, Reeves D, Gandara J, Chhangawala S, Ahsanuddin S, Simmons A, Nessel T, Sundaresh B, Pereira E, Jorgensen E, Kolokotronis SO, Kirchberger N, Garcia I, Gandara D, Dhanraj S, Nawrin T, Saletore Y, Alexander N, Vijay P, Hénaff EM, Zumbo P, Walsh M, O'Mullan GD, Tighe S, Dudley JT, Dunaif A, Ennis S, O'Halloran E, Magalhaes TR, Boone B, Jones AL, Muth TR, Paolantonio KS, Alter E, Schadt EE, Garbarino J, Prill RJ, Carlton JM, Levy S, Mason CE.
Afshinnekoo E, et al. Among authors: kirchberger n.
Cell Syst. 2015 Jul 29;1(1):72-87. doi: 10.1016/j.cels.2015.01.001. Epub 2015 Mar 3.
Cell Syst. 2015.
PMID: 26594662
Free PMC article.
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Effects of TRH on heteromeric rat erg1a/1b K+ channels are dominated by the rerg1b subunit.
Kirchberger NM, Wulfsen I, Schwarz JR, Bauer CK.
Kirchberger NM, et al.
J Physiol. 2006 Feb 15;571(Pt 1):27-42. doi: 10.1113/jphysiol.2005.101667. Epub 2005 Dec 8.
J Physiol. 2006.
PMID: 16339175
Free PMC article.
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