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Aneuploidy Can Be an Evolutionary Diversion on the Path to Adaptation.
Mol Biol Evol. 2024 Mar 1;41(3):msae052. doi: 10.1093/molbev/msae052.
Mol Biol Evol. 2024.
PMID: 38427813
Free PMC article.
Active compensation for changes in TDH3 expression mediated by direct regulators of TDH3 in Saccharomyces cerevisiae.
Vande Zande P, Siddiq MA, Hodgins-Davis A, Kim L, Wittkopp PJ.
Vande Zande P, et al.
PLoS Genet. 2023 Dec 13;19(12):e1011078. doi: 10.1371/journal.pgen.1011078. eCollection 2023 Dec.
PLoS Genet. 2023.
PMID: 38091349
Free PMC article.
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The Dynamic Fungal Genome: Polyploidy, Aneuploidy and Copy Number Variation in Response to Stress.
Vande Zande P, Zhou X, Selmecki A.
Vande Zande P, et al.
Annu Rev Microbiol. 2023 Sep 15;77:341-361. doi: 10.1146/annurev-micro-041320-112443. Epub 2023 Jun 12.
Annu Rev Microbiol. 2023.
PMID: 37307856
Free PMC article.
Review.
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Network Topology Can Explain Differences in Pleiotropy Between Cis- and Trans-regulatory Mutations.
Vande Zande P, Wittkopp PJ.
Vande Zande P, et al.
Mol Biol Evol. 2022 Dec 5;39(12):msac266. doi: 10.1093/molbev/msac266.
Mol Biol Evol. 2022.
PMID: 36508350
Free PMC article.
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Pleiotropic effects of trans-regulatory mutations on fitness and gene expression.
Vande Zande P, Hill MS, Wittkopp PJ.
Vande Zande P, et al.
Science. 2022 Jul;377(6601):105-109. doi: 10.1126/science.abj7185. Epub 2022 Jun 30.
Science. 2022.
PMID: 35771906
Free PMC article.
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Mutational sources of trans-regulatory variation affecting gene expression in Saccharomyces cerevisiae.
Duveau F, Vande Zande P, Metzger BP, Diaz CJ, Walker EA, Tryban S, Siddiq MA, Yang B, Wittkopp PJ.
Duveau F, et al. Among authors: vande zande p.
Elife. 2021 Aug 31;10:e67806. doi: 10.7554/eLife.67806.
Elife. 2021.
PMID: 34463616
Free PMC article.
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Molecular and evolutionary processes generating variation in gene expression.
Hill MS, Vande Zande P, Wittkopp PJ.
Hill MS, et al. Among authors: vande zande p.
Nat Rev Genet. 2021 Apr;22(4):203-215. doi: 10.1038/s41576-020-00304-w. Epub 2020 Dec 2.
Nat Rev Genet. 2021.
PMID: 33268840
Free PMC article.
Review.
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