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HKDC1, a target of TFEB, is essential to maintain both mitochondrial and lysosomal homeostasis, preventing cellular senescence.
Cui M, Yamano K, Yamamoto K, Yamamoto-Imoto H, Minami S, Yamamoto T, Matsui S, Kaminishi T, Shima T, Ogura M, Tsuchiya M, Nishino K, Layden BT, Kato H, Ogawa H, Oki S, Okada Y, Isaka Y, Kosako H, Matsuda N, Yoshimori T, Nakamura S. Cui M, et al. Among authors: kaminishi t. Proc Natl Acad Sci U S A. 2024 Jan 9;121(2):e2306454120. doi: 10.1073/pnas.2306454120. Epub 2024 Jan 3. Proc Natl Acad Sci U S A. 2024. PMID: 38170752
YIPF3 and YIPF4 regulate autophagic turnover of the Golgi apparatus.
Kitta S, Kaminishi T, Higashi M, Shima T, Nishino K, Nakamura N, Kosako H, Yoshimori T, Kuma A. Kitta S, et al. Among authors: kaminishi t. EMBO J. 2024 May 31. doi: 10.1038/s44318-024-00131-3. Online ahead of print. EMBO J. 2024. PMID: 38822137 Free article.
Selective-plane-activation structured illumination microscopy.
Temma K, Oketani R, Kubo T, Bando K, Maeda S, Sugiura K, Matsuda T, Heintzmann R, Kaminishi T, Fukuda K, Hamasaki M, Nagai T, Fujita K. Temma K, et al. Among authors: kaminishi t. Nat Methods. 2024 May;21(5):889-896. doi: 10.1038/s41592-024-02236-3. Epub 2024 Apr 5. Nat Methods. 2024. PMID: 38580844
Inhibition of translation initiation complex formation by GE81112 unravels a 16S rRNA structural switch involved in P-site decoding.
Fabbretti A, Schedlbauer A, Brandi L, Kaminishi T, Giuliodori AM, Garofalo R, Ochoa-Lizarralde B, Takemoto C, Yokoyama S, Connell SR, Gualerzi CO, Fucini P. Fabbretti A, et al. Among authors: kaminishi t. Proc Natl Acad Sci U S A. 2016 Apr 19;113(16):E2286-95. doi: 10.1073/pnas.1521156113. Epub 2016 Apr 6. Proc Natl Acad Sci U S A. 2016. PMID: 27071098 Free PMC article.
Purification, crystallization and preliminary X-ray diffraction study of human ribosomal protein L10 core domain.
Nishimura M, Kaminishi T, Kawazoe M, Shirouzu M, Takemoto C, Yokoyama S, Tanaka A, Sugano S, Yoshida T, Ohkubo T, Kobayashi Y. Nishimura M, et al. Among authors: kaminishi t. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Nov 1;63(Pt 11):950-2. doi: 10.1107/S1744309107048142. Epub 2007 Oct 24. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007. PMID: 18007048 Free PMC article.
A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Schedlbauer A, Iturrioz I, Ochoa-Lizarralde B, Diercks T, López-Alonso JP, Lavin JL, Kaminishi T, Çapuni R, Dhimole N, de Astigarraga E, Gil-Carton D, Fucini P, Connell SR. Schedlbauer A, et al. Among authors: kaminishi t. Sci Adv. 2021 Jun 4;7(23):eabf7547. doi: 10.1126/sciadv.abf7547. Print 2021 Jun. Sci Adv. 2021. PMID: 34088665 Free PMC article.
RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket.
López-Alonso JP, Kaminishi T, Kikuchi T, Hirata Y, Iturrioz I, Dhimole N, Schedlbauer A, Hase Y, Goto S, Kurita D, Muto A, Zhou S, Naoe C, Mills DJ, Gil-Carton D, Takemoto C, Himeno H, Fucini P, Connell SR. López-Alonso JP, et al. Among authors: kaminishi t. Nucleic Acids Res. 2017 Jun 20;45(11):6945-6959. doi: 10.1093/nar/gkx324. Nucleic Acids Res. 2017. PMID: 28482099 Free PMC article.
Structure of a 30S pre-initiation complex stalled by GE81112 reveals structural parallels in bacterial and eukaryotic protein synthesis initiation pathways.
López-Alonso JP, Fabbretti A, Kaminishi T, Iturrioz I, Brandi L, Gil-Carton D, Gualerzi CO, Fucini P, Connell SR. López-Alonso JP, et al. Among authors: kaminishi t. Nucleic Acids Res. 2017 Feb 28;45(4):2179-2187. doi: 10.1093/nar/gkw1251. Nucleic Acids Res. 2017. PMID: 27986852 Free PMC article.
38 results