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BCFtools/liftover: an accurate and comprehensive tool to convert genetic variants across genome assemblies.
Bioinformatics. 2024 Jan 2;40(2):btae038. doi: 10.1093/bioinformatics/btae038.
Bioinformatics. 2024.
PMID: 38261650
Free PMC article.
The origins and functional effects of postzygotic mutations throughout the human life span.
Rockweiler NB, Ramu A, Nagirnaja L, Wong WH, Noordam MJ, Drubin CW, Huang N, Miller B, Todres EZ, Vigh-Conrad KA, Zito A, Small KS, Ardlie KG, Cohen BA, Conrad DF.
Rockweiler NB, et al.
Science. 2023 Apr 14;380(6641):eabn7113. doi: 10.1126/science.abn7113. Epub 2023 Apr 14.
Science. 2023.
PMID: 37053313
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Comparative single-cell analysis of biopsies clarifies pathogenic mechanisms in Klinefelter syndrome.
Mahyari E, Guo J, Lima AC, Lewinsohn DP, Stendahl AM, Vigh-Conrad KA, Nie X, Nagirnaja L, Rockweiler NB, Carrell DT, Hotaling JM, Aston KI, Conrad DF.
Mahyari E, et al. Among authors: rockweiler nb.
Am J Hum Genet. 2021 Oct 7;108(10):1924-1945. doi: 10.1016/j.ajhg.2021.09.001.
Am J Hum Genet. 2021.
PMID: 34626582
Free PMC article.
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Tissue-specific DNA methylation is conserved across human, mouse, and rat, and driven by primary sequence conservation.
Zhou J, Sears RL, Xing X, Zhang B, Li D, Rockweiler NB, Jang HS, Choudhary MNK, Lee HJ, Lowdon RF, Arand J, Tabers B, Gu CC, Cicero TJ, Wang T.
Zhou J, et al. Among authors: rockweiler nb.
BMC Genomics. 2017 Sep 12;18(1):724. doi: 10.1186/s12864-017-4115-6.
BMC Genomics. 2017.
PMID: 28899353
Free PMC article.
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Integrative analysis of 111 reference human epigenomes.
Roadmap Epigenomics Consortium; Kundaje A, Meuleman W, Ernst J, Bilenky M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, Wang J, Ziller MJ, Amin V, Whitaker JW, Schultz MD, Ward LD, Sarkar A, Quon G, Sandstrom RS, Eaton ML, Wu YC, Pfenning AR, Wang X, Claussnitzer M, Liu Y, Coarfa C, Harris RA, Shoresh N, Epstein CB, Gjoneska E, Leung D, Xie W, Hawkins RD, Lister R, Hong C, Gascard P, Mungall AJ, Moore R, Chuah E, Tam A, Canfield TK, Hansen RS, Kaul R, Sabo PJ, Bansal MS, Carles A, Dixon JR, Farh KH, Feizi S, Karlic R, Kim AR, Kulkarni A, Li D, Lowdon R, Elliott G, Mercer TR, Neph SJ, Onuchic V, Polak P, Rajagopal N, Ray P, Sallari RC, Siebenthall KT, Sinnott-Armstrong NA, Stevens M, Thurman RE, Wu J, Zhang B, Zhou X, Beaudet AE, Boyer LA, De Jager PL, Farnham PJ, Fisher SJ, Haussler D, Jones SJ, Li W, Marra MA, McManus MT, Sunyaev S, Thomson JA, Tlsty TD, Tsai LH, Wang W, Waterland RA, Zhang MQ, Chadwick LH, Bernstein BE, Costello JF, Ecker JR, Hirst M, Meissner A, Milosavljevic A, Ren B, Stamatoyannopoulos JA, Wang T, Kellis M.
Roadmap Epigenomics Consortium, et al.
Nature. 2015 Feb 19;518(7539):317-30. doi: 10.1038/nature14248.
Nature. 2015.
PMID: 25693563
Free PMC article.
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Epigenomic annotation of genetic variants using the Roadmap Epigenome Browser.
Zhou X, Li D, Zhang B, Lowdon RF, Rockweiler NB, Sears RL, Madden PA, Smirnov I, Costello JF, Wang T.
Zhou X, et al. Among authors: rockweiler nb.
Nat Biotechnol. 2015 Apr;33(4):345-6. doi: 10.1038/nbt.3158.
Nat Biotechnol. 2015.
PMID: 25690851
Free PMC article.
No abstract available.
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Using ligand-based virtual screening to allosterically stabilize the activated state of a GPCR.
Taylor CM, Rockweiler NB, Liu C, Rikimaru L, Tunemalm AK, Kisselev OG, Marshall GR.
Taylor CM, et al. Among authors: rockweiler nb.
Chem Biol Drug Des. 2010 Mar;75(3):325-32. doi: 10.1111/j.1747-0285.2009.00944.x. Epub 2010 Jan 19.
Chem Biol Drug Des. 2010.
PMID: 20659113
Free PMC article.
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The Role of Plasmalemmal-Cortical Anchoring on the Stability of Transmembrane Electropores.
Kennedy SM, Ji Z, Rockweiler NB, Hahn AR, Booske JH, Hagness SC.
Kennedy SM, et al. Among authors: rockweiler nb.
IEEE Trans Dielectr Electr Insul. 2009 Oct 1;16(5):1251-1258. doi: 10.1109/TDEI.2009.5293935.
IEEE Trans Dielectr Electr Insul. 2009.
PMID: 20490371
Free PMC article.
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