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Improving polygenic risk prediction in admixed populations by explicitly modeling ancestral-differential effects via GAUDI.
Sun Q, Rowland BT, Chen J, Mikhaylova AV, Avery C, Peters U, Lundin J, Matise T, Buyske S, Tao R, Mathias RA, Reiner AP, Auer PL, Cox NJ, Kooperberg C, Thornton TA, Raffield LM, Li Y. Sun Q, et al. Among authors: tao r. Nat Commun. 2024 Feb 3;15(1):1016. doi: 10.1038/s41467-024-45135-z. Nat Commun. 2024. PMID: 38310129 Free PMC article.
Analysis of genetically determined gene expression suggests role of inflammatory processes in exfoliation syndrome.
Hirbo JB, Pasutto F, Gamazon ER, Evans P, Pawar P, Berner D, Sealock J, Tao R, Straub PS, Konkashbaev AI, Breyer MA, Schlötzer-Schrehardt U, Reis A, Brantley MA Jr, Khor CC, Joos KM, Cox NJ. Hirbo JB, et al. Among authors: tao r. BMC Genomics. 2023 Feb 16;24(1):75. doi: 10.1186/s12864-023-09179-7. BMC Genomics. 2023. PMID: 36797672 Free PMC article.
Estimating heritability explained by local ancestry and evaluating stratification bias in admixture mapping from summary statistics.
Chan TF, Rui X, Conti DV, Fornage M, Graff M, Haessler J, Haiman C, Highland HM, Jung SY, Kenny E, Kooperberg C, Marchland LL, North KE, Tao R, Wojcik G, Gignoux CR; PAGE Consortium; Chiang CWK, Mancuso N. Chan TF, et al. Among authors: tao r. bioRxiv [Preprint]. 2023 Apr 18:2023.04.10.536252. doi: 10.1101/2023.04.10.536252. bioRxiv. 2023. PMID: 37131817 Free PMC article. Updated. Preprint.
Estimating heritability explained by local ancestry and evaluating stratification bias in admixture mapping from summary statistics.
Chan TF, Rui X, Conti DV, Fornage M, Graff M, Haessler J, Haiman C, Highland HM, Jung SY, Kenny EE, Kooperberg C, Le Marchand L, North KE, Tao R, Wojcik G, Gignoux CR; PAGE Consortium; Chiang CWK, Mancuso N. Chan TF, et al. Among authors: tao r. Am J Hum Genet. 2023 Nov 2;110(11):1853-1862. doi: 10.1016/j.ajhg.2023.09.012. Epub 2023 Oct 23. Am J Hum Genet. 2023. PMID: 37875120 Free PMC article.
Novel ancestry-specific primary open-angle glaucoma loci and shared biology with vascular mechanisms and cell proliferation.
Lo Faro V, Bhattacharya A, Zhou W, Zhou D, Wang Y, Läll K, Kanai M, Lopera-Maya E, Straub P, Pawar P, Tao R, Zhong X, Namba S; Global Biobank Meta-analysis Initiative; Sanna S, Nolte IM, Okada Y, Ingold N, MacGregor S, Snieder H, Surakka I, Shortt J, Gignoux C, Rafaels N, Crooks K, Verma A, Verma SS, Guare L, Rader DJ, Willer C, Martin AR, Brantley MA Jr, Gamazon ER, Jansonius NM, Joos K, Cox NJ, Hirbo J. Lo Faro V, et al. Among authors: tao r. Cell Rep Med. 2024 Feb 20;5(2):101430. doi: 10.1016/j.xcrm.2024.101430. Cell Rep Med. 2024. PMID: 38382466 Free PMC article.
Using genome and transcriptome data from African-ancestry female participants to identify putative breast cancer susceptibility genes.
Ping J, Jia G, Cai Q, Guo X, Tao R, Ambrosone C, Huo D, Ambs S, Barnard ME, Chen Y, Garcia-Closas M, Gu J, Hu JJ, John EM, Li CI, Nathanson K, Nemesure B, Olopade OI, Pal T, Press MF, Sanderson M, Sandler DP, Yoshimatsu T, Adejumo PO, Ahearn T, Brewster AM, Hennis AJM, Makumbi T, Ndom P, O'Brien KM, Olshan AF, Oluwasanu MM, Reid S, Yao S, Butler EN, Huang M, Ntekim A, Li B, Troester MA, Palmer JR, Haiman CA, Long J, Zheng W. Ping J, et al. Among authors: tao r. Nat Commun. 2024 May 2;15(1):3718. doi: 10.1038/s41467-024-47650-5. Nat Commun. 2024. PMID: 38697998 Free PMC article.
Genome-wide association analyses of breast cancer in women of African ancestry identify new susceptibility loci and improve risk prediction.
Jia G, Ping J, Guo X, Yang Y, Tao R, Li B, Ambs S, Barnard ME, Chen Y, Garcia-Closas M, Gu J, Hu JJ, Huo D, John EM, Li CI, Li JL, Nathanson KL, Nemesure B, Olopade OI, Pal T, Press MF, Sanderson M, Sandler DP, Shu XO, Troester MA, Yao S, Adejumo PO, Ahearn T, Brewster AM, Hennis AJM, Makumbi T, Ndom P, O'Brien KM, Olshan AF, Oluwasanu MM, Reid S, Butler EN, Huang M, Ntekim A, Qian H, Zhang H, Ambrosone CB, Cai Q, Long J, Palmer JR, Haiman CA, Zheng W. Jia G, et al. Among authors: tao r. Nat Genet. 2024 May;56(5):819-826. doi: 10.1038/s41588-024-01736-4. Epub 2024 May 13. Nat Genet. 2024. PMID: 38741014
Global Biobank analyses provide lessons for developing polygenic risk scores across diverse cohorts.
Wang Y, Namba S, Lopera E, Kerminen S, Tsuo K, Läll K, Kanai M, Zhou W, Wu KH, Favé MJ, Bhatta L, Awadalla P, Brumpton B, Deelen P, Hveem K, Lo Faro V, Mägi R, Murakami Y, Sanna S, Smoller JW, Uzunovic J, Wolford BN; Global Biobank Meta-analysis Initiative; Willer C, Gamazon ER, Cox NJ, Surakka I, Okada Y, Martin AR, Hirbo J. Wang Y, et al. Cell Genom. 2023 Jan 4;3(1):100241. doi: 10.1016/j.xgen.2022.100241. eCollection 2023 Jan 11. Cell Genom. 2023. PMID: 36777179 Free PMC article.
2,181 results