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plantMASST - Community-driven chemotaxonomic digitization of plants.
bioRxiv [Preprint]. 2024 May 14:2024.05.13.593988. doi: 10.1101/2024.05.13.593988.
bioRxiv. 2024.
PMID: 38798440
Free PMC article.
Preprint.
An intramolecular macrocyclase in plant ribosomal peptide biosynthesis.
Mydy LS, Hungerford J, Chigumba DN, Konwerski JR, Jantzi SC, Wang D, Smith JL, Kersten RD.
Mydy LS, et al. Among authors: chigumba dn.
Nat Chem Biol. 2024 Apr;20(4):530-540. doi: 10.1038/s41589-024-01552-1. Epub 2024 Feb 14.
Nat Chem Biol. 2024.
PMID: 38355722
Free PMC article.
Item in Clipboard
HypoRiPPAtlas as an Atlas of hypothetical natural products for mass spectrometry database search.
Lee YY, Guler M, Chigumba DN, Wang S, Mittal N, Miller C, Krummenacher B, Liu H, Cao L, Kannan A, Narayan K, Slocum ST, Roth BL, Gurevich A, Behsaz B, Kersten RD, Mohimani H.
Lee YY, et al. Among authors: chigumba dn.
Nat Commun. 2023 Jul 14;14(1):4219. doi: 10.1038/s41467-023-39905-4.
Nat Commun. 2023.
PMID: 37452020
Free PMC article.
Item in Clipboard
A matrigel-free method for culture of pancreatic endocrine-like cells in defined protein-based hydrogels.
Kozlowski MT, Zook HN, Chigumba DN, Johnstone CP, Caldera LF, Shih HP, Tirrell DA, Ku HT.
Kozlowski MT, et al. Among authors: chigumba dn.
Front Bioeng Biotechnol. 2023 Mar 9;11:1144209. doi: 10.3389/fbioe.2023.1144209. eCollection 2023.
Front Bioeng Biotechnol. 2023.
PMID: 36970620
Free PMC article.
Item in Clipboard
Plant Copper Metalloenzymes As Prospects for New Metabolism Involving Aromatic Compounds.
Mydy LS, Chigumba DN, Kersten RD.
Mydy LS, et al. Among authors: chigumba dn.
Front Plant Sci. 2021 Nov 29;12:692108. doi: 10.3389/fpls.2021.692108. eCollection 2021.
Front Plant Sci. 2021.
PMID: 34925392
Free PMC article.
Review.
Item in Clipboard
Discovery and biosynthesis of cyclic plant peptides via autocatalytic cyclases.
Chigumba DN, Mydy LS, de Waal F, Li W, Shafiq K, Wotring JW, Mohamed OG, Mladenovic T, Tripathi A, Sexton JZ, Kautsar S, Medema MH, Kersten RD.
Chigumba DN, et al.
Nat Chem Biol. 2022 Jan;18(1):18-28. doi: 10.1038/s41589-021-00892-6. Epub 2021 Nov 22.
Nat Chem Biol. 2022.
PMID: 34811516
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