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Identification of a regulatory pathway governing TRAF1 via an arthritis-associated non-coding variant.
Wang Q, Martínez-Bonet M, Kim T, Sparks JA, Ishigaki K, Chen X, Sudman M, Aguiar V, Sim S, Hernandez MC, Chiu DJ, Wactor A, Wauford B, Marion MC, Gutierrez-Arcelus M, Bowes J, Eyre S, Nordal E, Prahalad S, Rygg M, Videm V, Raychaudhuri S, Weirauch MT, Langefeld CD, Thompson SD, Nigrovic PA. Wang Q, et al. Among authors: chen x. Cell Genom. 2024 Feb 14;4(2):100502. doi: 10.1016/j.xgen.2024.100502. Cell Genom. 2024. PMID: 38359789 Free PMC article. No abstract available.
The Human Transcription Factors.
Lambert SA, Jolma A, Campitelli LF, Das PK, Yin Y, Albu M, Chen X, Taipale J, Hughes TR, Weirauch MT. Lambert SA, et al. Among authors: chen x. Cell. 2018 Feb 8;172(4):650-665. doi: 10.1016/j.cell.2018.01.029. Cell. 2018. PMID: 29425488 Free article. Review.
The Human Transcription Factors.
Lambert SA, Jolma A, Campitelli LF, Das PK, Yin Y, Albu M, Chen X, Taipale J, Hughes TR, Weirauch MT. Lambert SA, et al. Among authors: chen x. Cell. 2018 Oct 4;175(2):598-599. doi: 10.1016/j.cell.2018.09.045. Cell. 2018. PMID: 30290144 Free article. No abstract available.
Deciphering cis-regulatory grammar with deep learning.
Miraldi ER, Chen X, Weirauch MT. Miraldi ER, et al. Among authors: chen x. Nat Genet. 2021 Mar;53(3):266-268. doi: 10.1038/s41588-021-00814-1. Nat Genet. 2021. PMID: 33686263 No abstract available.
High-throughput identification of functional regulatory SNPs in systemic lupus erythematosus.
Nigrovic PA, Wang Q, Kim T, Martinez-Bonet M, Aguiar VRC, Sim S, Cui J, Sparks JA, Chen X, Todd M, Wauford B, Marion MC, Langefeld CD, Weirauch MT, Gutierrez-Arcelus M. Nigrovic PA, et al. Among authors: chen x. bioRxiv [Preprint]. 2024 Apr 12:2023.08.16.553538. doi: 10.1101/2023.08.16.553538. bioRxiv. 2024. PMID: 37645953 Free PMC article. Preprint.
Identification of a regulatory pathway governing TRAF1 via an arthritis-associated non-coding variant.
Wang Q, Martínez-Bonet M, Kim T, Sparks JA, Ishigaki K, Chen X, Sudman M, Aguiar V, Sim S, Hernandez MC, Chiu DJ, Wactor A, Wauford B, Marion MC, Gutierrez-Arcelus M, Bowes J, Eyre S, Nordal E, Prahalad S, Rygg M, Videm V, Raychaudhuri S, Weirauch MT, Langefeld CD, Thompson SD, Nigrovic PA. Wang Q, et al. Among authors: chen x. Cell Genom. 2023 Oct 16;3(11):100420. doi: 10.1016/j.xgen.2023.100420. eCollection 2023 Nov 8. Cell Genom. 2023. PMID: 38020975 Free PMC article.
Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development.
Kim T, Martínez-Bonet M, Wang Q, Hackert N, Sparks JA, Baglaenko Y, Koh B, Darbousset R, Laza-Briviesca R, Chen X, Aguiar VRC, Chiu DJ, Westra HJ, Gutierrez-Arcelus M, Weirauch MT, Raychaudhuri S, Rao DA, Nigrovic PA. Kim T, et al. Among authors: chen x. Nat Commun. 2024 Mar 9;15(1):2150. doi: 10.1038/s41467-024-46457-8. Nat Commun. 2024. PMID: 38459032 Free PMC article.
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