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Drug resistance and epidemiological success of modern Mycobacterium tuberculosis lineages in western India.
J Infect Dis. 2024 May 31:jiae240. doi: 10.1093/infdis/jiae240. Online ahead of print.
J Infect Dis. 2024.
PMID: 38819323
Evaluating generalizability of artificial intelligence models for molecular datasets.
Ektefaie Y, Shen A, Bykova D, Marin M, Zitnik M, Farhat M.
Ektefaie Y, et al.
bioRxiv [Preprint]. 2024 Feb 28:2024.02.25.581982. doi: 10.1101/2024.02.25.581982.
bioRxiv. 2024.
PMID: 38464295
Free PMC article.
Preprint.
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Multimodal learning with graphs.
Ektefaie Y, Dasoulas G, Noori A, Farhat M, Zitnik M.
Ektefaie Y, et al.
Nat Mach Intell. 2023 Apr;5(4):340-350. doi: 10.1038/s42256-023-00624-6. Epub 2023 Apr 3.
Nat Mach Intell. 2023.
PMID: 38076673
Free PMC article.
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A convolutional neural network highlights mutations relevant to antimicrobial resistance in Mycobacterium tuberculosis.
Green AG, Yoon CH, Chen ML, Ektefaie Y, Fina M, Freschi L, Gröschel MI, Kohane I, Beam A, Farhat M.
Green AG, et al. Among authors: ektefaie y.
Nat Commun. 2022 Jul 2;13(1):3817. doi: 10.1038/s41467-022-31236-0.
Nat Commun. 2022.
PMID: 35780211
Free PMC article.
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Enriching the Study Population for Ischemic Stroke Therapeutic Trials Using a Machine Learning Algorithm.
Maharjan J, Ektefaie Y, Ryan L, Mataraso S, Barnes G, Shokouhi S, Green-Saxena A, Calvert J, Mao Q, Das R.
Maharjan J, et al. Among authors: ektefaie y.
Front Neurol. 2022 Jan 25;12:784250. doi: 10.3389/fneur.2021.784250. eCollection 2021.
Front Neurol. 2022.
PMID: 35145468
Free PMC article.
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Integrative multiomics-histopathology analysis for breast cancer classification.
Ektefaie Y, Yuan W, Dillon DA, Lin NU, Golden JA, Kohane IS, Yu KH.
Ektefaie Y, et al.
NPJ Breast Cancer. 2021 Nov 29;7(1):147. doi: 10.1038/s41523-021-00357-y.
NPJ Breast Cancer. 2021.
PMID: 34845230
Free PMC article.
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Globally diverse Mycobacterium tuberculosis resistance acquisition: a retrospective geographical and temporal analysis of whole genome sequences.
Ektefaie Y, Dixit A, Freschi L, Farhat MR.
Ektefaie Y, et al.
Lancet Microbe. 2021 Mar;2(3):e96-e104. doi: 10.1016/s2666-5247(20)30195-6. Epub 2021 Jan 27.
Lancet Microbe. 2021.
PMID: 33912853
Free PMC article.
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