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Integrative detection and analysis of structural variation in cancer genomes.
Dixon JR, Xu J, Dileep V, Zhan Y, Song F, Le VT, Yardımcı GG, Chakraborty A, Bann DV, Wang Y, Clark R, Zhang L, Yang H, Liu T, Iyyanki S, An L, Pool C, Sasaki T, Rivera-Mulia JC, Ozadam H, Lajoie BR, Kaul R, Buckley M, Lee K, Diegel M, Pezic D, Ernst C, Hadjur S, Odom DT, Stamatoyannopoulos JA, Broach JR, Hardison RC, Ay F, Noble WS, Dekker J, Gilbert DM, Yue F. Dixon JR, et al. Among authors: broach jr. Nat Genet. 2018 Oct;50(10):1388-1398. doi: 10.1038/s41588-018-0195-8. Epub 2018 Sep 10. Nat Genet. 2018. PMID: 30202056 Free PMC article.
Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants.
Paulson JN, Williams BL, Hehnly C, Mishra N, Sinnar SA, Zhang L, Ssentongo P, Mbabazi-Kabachelor E, Wijetunge DSS, von Bredow B, Mulondo R, Kiwanuka J, Bajunirwe F, Bazira J, Bebell LM, Burgoine K, Couto-Rodriguez M, Ericson JE, Erickson T, Ferrari M, Gladstone M, Guo C, Haran M, Hornig M, Isaacs AM, Kaaya BN, Kangere SM, Kulkarni AV, Kumbakumba E, Li X, Limbrick DD Jr, Magombe J, Morton SU, Mugamba J, Ng J, Olupot-Olupot P, Onen J, Peterson MR, Roy F, Sheldon K, Townsend R, Weeks AD, Whalen AJ, Quackenbush J, Ssenyonga P, Galperin MY, Almeida M, Atkins H, Warf BC, Lipkin WI, Broach JR, Schiff SJ. Paulson JN, et al. Among authors: broach jr. Sci Transl Med. 2020 Sep 30;12(563):eaba0565. doi: 10.1126/scitranslmed.aba0565. Sci Transl Med. 2020. PMID: 32998967 Free PMC article.
Increased Incidence of IKZF1 deletions and IGH-CRLF2 translocations in B-ALL of Hispanic/Latino children-a novel health disparity.
Raca G, Abdel-Azim H, Yue F, Broach J, Payne JL, Reeves ME, Gowda C, Schramm J, Desai D, Dovat E, Hu T, Berg AS, Bhojwani D, Payne KJ, Dovat S. Raca G, et al. Among authors: broach j. Leukemia. 2021 Aug;35(8):2399-2402. doi: 10.1038/s41375-021-01133-4. Epub 2021 Feb 2. Leukemia. 2021. PMID: 33531655 Free PMC article. No abstract available.
Differential richness inference for 16S rRNA marker gene surveys.
Kumar MS, Slud EV, Hehnly C, Zhang L, Broach J, Irizarry RA, Schiff SJ, Paulson JN. Kumar MS, et al. Among authors: broach j. Genome Biol. 2022 Aug 1;23(1):166. doi: 10.1186/s13059-022-02722-x. Genome Biol. 2022. PMID: 35915508 Free PMC article.
Subtype-specific 3D genome alteration in acute myeloid leukaemia.
Xu J, Song F, Lyu H, Kobayashi M, Zhang B, Zhao Z, Hou Y, Wang X, Luan Y, Jia B, Stasiak L, Wong JH, Wang Q, Jin Q, Jin Q, Fu Y, Yang H, Hardison RC, Dovat S, Platanias LC, Diao Y, Yang Y, Yamada T, Viny AD, Levine RL, Claxton D, Broach JR, Zheng H, Yue F. Xu J, et al. Among authors: broach jr. Nature. 2022 Nov;611(7935):387-398. doi: 10.1038/s41586-022-05365-x. Epub 2022 Oct 26. Nature. 2022. PMID: 36289338 Free PMC article.
256 results