Holding AN - Search Results

1

ZMIZ1 enhances ERα-dependent expression of E2F2 in breast cancer.

Zhao W, Rose SF, Blake R, Godicelj A, Cullen AE, Stenning J, Beevors L, Gehrung M, Kumar S, Kishore K, Sawle A, Eldridge M, Giorgi FM, Bridge KS, Markowetz F, Holding AN. Zhao W, et al. Among authors: holding an. J Mol Endocrinol. 2024 Apr 25;73(1):e230133. doi: 10.1530/JME-23-0133. Print 2024 Jul 1. J Mol Endocrinol. 2024. PMID: 38564418 Free PMC article.

2

Genome-wide Estrogen Receptor-α activation is sustained, not cyclical.

Holding AN, Cullen AE, Markowetz F. Holding AN, et al. Elife. 2018 Nov 20;7:e40854. doi: 10.7554/eLife.40854. Elife. 2018. PMID: 30457555 Free PMC article.

3

VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer.

Holding AN, Giorgi FM, Donnelly A, Cullen AE, Nagarajan S, Selth LA, Markowetz F. Holding AN, et al. Genome Biol. 2019 May 13;20(1):91. doi: 10.1186/s13059-019-1698-z. Genome Biol. 2019. PMID: 31084623 Free PMC article.

4

Correction to: VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer.

Holding AN, Giorgi FM, Donnelly A, Cullen AE, Nagarajan S, Selth LA, Markowetz F. Holding AN, et al. Genome Biol. 2019 Jun 14;20(1):122. doi: 10.1186/s13059-019-1733-0. Genome Biol. 2019. PMID: 31200751 Free PMC article.

5

Web tools to fight pandemics: the COVID-19 experience.

Mercatelli D, Holding AN, Giorgi FM. Mercatelli D, et al. Among authors: holding an. Brief Bioinform. 2021 Mar 22;22(2):690-700. doi: 10.1093/bib/bbaa261. Brief Bioinform. 2021. PMID: 33057582 Free PMC article.

6

Detection of subtype-specific breast cancer surface protein biomarkers via a novel transcriptomics approach.

Mercatelli D, Formaggio F, Caprini M, Holding A, Giorgi FM. Mercatelli D, et al. Biosci Rep. 2021 Dec 22;41(12):BSR20212218. doi: 10.1042/BSR20212218. Biosci Rep. 2021. PMID: 34750607 Free PMC article.

7

Parallel factor ChIP provides essential internal control for quantitative differential ChIP-seq.

Guertin MJ, Cullen AE, Markowetz F, Holding AN. Guertin MJ, et al. Among authors: holding an. Nucleic Acids Res. 2018 Jul 6;46(12):e75. doi: 10.1093/nar/gky252. Nucleic Acids Res. 2018. PMID: 29672735 Free PMC article.

8

Data generation and network reconstruction strategies for single cell transcriptomic profiles of CRISPR-mediated gene perturbations.

Holding AN, Cook HV, Markowetz F. Holding AN, et al. Biochim Biophys Acta Gene Regul Mech. 2020 Jun;1863(6):194441. doi: 10.1016/j.bbagrm.2019.194441. Epub 2019 Nov 20. Biochim Biophys Acta Gene Regul Mech. 2020. PMID: 31756390 Review.

9

A quantitative mass spectrometry-based approach to monitor the dynamics of endogenous chromatin-associated protein complexes.

Papachristou EK, Kishore K, Holding AN, Harvey K, Roumeliotis TI, Chilamakuri CSR, Omarjee S, Chia KM, Swarbrick A, Lim E, Markowetz F, Eldridge M, Siersbaek R, D'Santos CS, Carroll JS. Papachristou EK, et al. Among authors: holding an. Nat Commun. 2018 Jun 13;9(1):2311. doi: 10.1038/s41467-018-04619-5. Nat Commun. 2018. PMID: 29899353 Free PMC article.

10

Intestinal region-specific Wnt signalling profiles reveal interrelation between cell identity and oncogenic pathway activity in cancer development.

Adam RS, van Neerven SM, Pleguezuelos-Manzano C, Simmini S, Léveillé N, de Groot NE, Holding AN, Markowetz F, Vermeulen L. Adam RS, et al. Among authors: holding an. Cancer Cell Int. 2020 Dec 3;20(1):578. doi: 10.1186/s12935-020-01661-6. Cancer Cell Int. 2020. PMID: 33292279 Free PMC article.

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