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Gut microbiome and metabolome profiling in Framingham heart study reveals cholesterol-metabolizing bacteria.
Cell. 2024 Apr 11;187(8):1834-1852.e19. doi: 10.1016/j.cell.2024.03.014. Epub 2024 Apr 2.
Cell. 2024.
PMID: 38569543
A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research.
Poyet M, Groussin M, Gibbons SM, Avila-Pacheco J, Jiang X, Kearney SM, Perrotta AR, Berdy B, Zhao S, Lieberman TD, Swanson PK, Smith M, Roesemann S, Alexander JE, Rich SA, Livny J, Vlamakis H, Clish C, Bullock K, Deik A, Scott J, Pierce KA, Xavier RJ, Alm EJ.
Poyet M, et al. Among authors: berdy b.
Nat Med. 2019 Sep;25(9):1442-1452. doi: 10.1038/s41591-019-0559-3. Epub 2019 Sep 2.
Nat Med. 2019.
PMID: 31477907
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Changes in Microbiome Confer Multigenerational Host Resistance after Sub-toxic Pesticide Exposure.
Wang GH, Berdy BM, Velasquez O, Jovanovic N, Alkhalifa S, Minbiole KPC, Brucker RM.
Wang GH, et al. Among authors: berdy bm.
Cell Host Microbe. 2020 Feb 12;27(2):213-224.e7. doi: 10.1016/j.chom.2020.01.009. Epub 2020 Feb 4.
Cell Host Microbe. 2020.
PMID: 32023487
Free article.
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Genome Sequence of Lichtheimia ornata, an Emerging Opportunistic Mucorales Pathogen.
Shea T, Mohabir JT, Kurbessoian T, Berdy B, Fontaine J, Gnirke A, Livny J, Stajich JE, Cuomo CA.
Shea T, et al. Among authors: berdy b.
Microbiol Resour Announc. 2023 Jul 18;12(7):e0033823. doi: 10.1128/mra.00338-23. Epub 2023 Jun 8.
Microbiol Resour Announc. 2023.
PMID: 37289095
Free PMC article.
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High-throughput automated microfluidic sample preparation for accurate microbial genomics.
Kim S, De Jonghe J, Kulesa AB, Feldman D, Vatanen T, Bhattacharyya RP, Berdy B, Gomez J, Nolan J, Epstein S, Blainey PC.
Kim S, et al. Among authors: berdy b.
Nat Commun. 2017 Jan 27;8:13919. doi: 10.1038/ncomms13919.
Nat Commun. 2017.
PMID: 28128213
Free PMC article.
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In situ cultivation of previously uncultivable microorganisms using the ichip.
Berdy B, Spoering AL, Ling LL, Epstein SS.
Berdy B, et al.
Nat Protoc. 2017 Oct;12(10):2232-2242. doi: 10.1038/nprot.2017.074. Epub 2017 Sep 29.
Nat Protoc. 2017.
PMID: 29532802
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Oxidative damage to DNA related to survivorship and carotenoid-based sexual ornamentation in the common yellowthroat.
Freeman-Gallant CR, Amidon J, Berdy B, Wein S, Taff CC, Haussmann MF.
Freeman-Gallant CR, et al. Among authors: berdy b.
Biol Lett. 2011 Jun 23;7(3):429-32. doi: 10.1098/rsbl.2010.1186. Epub 2011 Jan 19.
Biol Lett. 2011.
PMID: 21247942
Free PMC article.
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