Udeshi ND - Search Results

1

IRE1α recognizes a structural motif in cholera toxin to activate an unfolded protein response.

Simpson MS, De Luca H, Cauthorn S, Luong P, Udeshi ND, Svinkina T, Schmieder SS, Carr SA, Grey MJ, Lencer WI. Simpson MS, et al. Among authors: udeshi nd. J Cell Biol. 2024 Jul 1;223(7):e202402062. doi: 10.1083/jcb.202402062. Epub 2024 Apr 5. J Cell Biol. 2024. PMID: 38578285

2

Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells.

Han S, Udeshi ND, Deerinck TJ, Svinkina T, Ellisman MH, Carr SA, Ting AY. Han S, et al. Among authors: udeshi nd. Cell Chem Biol. 2017 Mar 16;24(3):404-414. doi: 10.1016/j.chembiol.2017.02.002. Epub 2017 Feb 23. Cell Chem Biol. 2017. PMID: 28238724 Free PMC article.

3

Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging.

Hung V, Zou P, Rhee HW, Udeshi ND, Cracan V, Svinkina T, Carr SA, Mootha VK, Ting AY. Hung V, et al. Among authors: udeshi nd. Mol Cell. 2014 Jul 17;55(2):332-41. doi: 10.1016/j.molcel.2014.06.003. Epub 2014 Jul 4. Mol Cell. 2014. PMID: 25002142 Free PMC article.

4

Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation.

Hung V, Lam SS, Udeshi ND, Svinkina T, Guzman G, Mootha VK, Carr SA, Ting AY. Hung V, et al. Among authors: udeshi nd. Elife. 2017 Apr 25;6:e24463. doi: 10.7554/eLife.24463. Elife. 2017. PMID: 28441135 Free PMC article.

5

Proteomic Analysis of Unbounded Cellular Compartments: Synaptic Clefts.

Loh KH, Stawski PS, Draycott AS, Udeshi ND, Lehrman EK, Wilton DK, Svinkina T, Deerinck TJ, Ellisman MH, Stevens B, Carr SA, Ting AY. Loh KH, et al. Among authors: udeshi nd. Cell. 2016 Aug 25;166(5):1295-1307.e21. doi: 10.1016/j.cell.2016.07.041. Cell. 2016. PMID: 27565350 Free PMC article.

6

Large-scale identification of ubiquitination sites by mass spectrometry.

Udeshi ND, Mertins P, Svinkina T, Carr SA. Udeshi ND, et al. Nat Protoc. 2013 Oct;8(10):1950-60. doi: 10.1038/nprot.2013.120. Epub 2013 Sep 19. Nat Protoc. 2013. PMID: 24051958 Free PMC article.

7

Protein phosphatase 1 regulates core PCP signaling.

Song S, Cho B, Weiner AT, Nissen SB, Naharros IO, Bosch PS, Suyama K, Hu Y, He L, Svinkina T, Udeshi ND, Carr SA, Perrimon N, Axelrod JD. Song S, et al. Among authors: udeshi nd. bioRxiv [Preprint]. 2023 Sep 13:2023.09.12.556998. doi: 10.1101/2023.09.12.556998. bioRxiv. 2023. PMID: 37745534 Free PMC article. Updated. Preprint.

8

Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.

Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA. Udeshi ND, et al. Mol Cell Proteomics. 2013 Mar;12(3):825-31. doi: 10.1074/mcp.O112.027094. Epub 2012 Dec 24. Mol Cell Proteomics. 2013. PMID: 23266961 Free PMC article.

9

An unbiased approach to identify endogenous substrates of "histone" deacetylase 8.

Olson DE, Udeshi ND, Wolfson NA, Pitcairn CA, Sullivan ED, Jaffe JD, Svinkina T, Natoli T, Lu X, Paulk J, McCarren P, Wagner FF, Barker D, Howe E, Lazzaro F, Gale JP, Zhang YL, Subramanian A, Fierke CA, Carr SA, Holson EB. Olson DE, et al. Among authors: udeshi nd. ACS Chem Biol. 2014 Oct 17;9(10):2210-6. doi: 10.1021/cb500492r. Epub 2014 Aug 11. ACS Chem Biol. 2014. PMID: 25089360 Free PMC article.

10

H2A.Z.1 Monoubiquitylation Antagonizes BRD2 to Maintain Poised Chromatin in ESCs.

Surface LE, Fields PA, Subramanian V, Behmer R, Udeshi N, Peach SE, Carr SA, Jaffe JD, Boyer LA. Surface LE, et al. Cell Rep. 2016 Feb 9;14(5):1142-1155. doi: 10.1016/j.celrep.2015.12.100. Epub 2016 Jan 21. Cell Rep. 2016. PMID: 26804911 Free PMC article.

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