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Probing the active fraction of soil microbiomes using BONCAT-FACS.
Couradeau E, Sasse J, Goudeau D, Nath N, Hazen TC, Bowen BP, Chakraborty R, Malmstrom RR, Northen TR. Couradeau E, et al. Among authors: malmstrom rr. Nat Commun. 2019 Jun 24;10(1):2770. doi: 10.1038/s41467-019-10542-0. Nat Commun. 2019. PMID: 31235780 Free PMC article.
Genome-wide identification of bacterial plant colonization genes.
Cole BJ, Feltcher ME, Waters RJ, Wetmore KM, Mucyn TS, Ryan EM, Wang G, Ul-Hasan S, McDonald M, Yoshikuni Y, Malmstrom RR, Deutschbauer AM, Dangl JL, Visel A. Cole BJ, et al. Among authors: malmstrom rr. PLoS Biol. 2017 Sep 22;15(9):e2002860. doi: 10.1371/journal.pbio.2002860. eCollection 2017 Sep. PLoS Biol. 2017. PMID: 28938018 Free PMC article.
Hidden diversity of soil giant viruses.
Schulz F, Alteio L, Goudeau D, Ryan EM, Yu FB, Malmstrom RR, Blanchard J, Woyke T. Schulz F, et al. Among authors: malmstrom rr. Nat Commun. 2018 Nov 19;9(1):4881. doi: 10.1038/s41467-018-07335-2. Nat Commun. 2018. PMID: 30451857 Free PMC article.
Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs.
Eloe-Fadrosh EA, Paez-Espino D, Jarett J, Dunfield PF, Hedlund BP, Dekas AE, Grasby SE, Brady AL, Dong H, Briggs BR, Li WJ, Goudeau D, Malmstrom R, Pati A, Pett-Ridge J, Rubin EM, Woyke T, Kyrpides NC, Ivanova NN. Eloe-Fadrosh EA, et al. Nat Commun. 2016 Jan 27;7:10476. doi: 10.1038/ncomms10476. Nat Commun. 2016. PMID: 26814032 Free PMC article.
A pipeline for targeted metagenomics of environmental bacteria.
Grieb A, Bowers RM, Oggerin M, Goudeau D, Lee J, Malmstrom RR, Woyke T, Fuchs BM. Grieb A, et al. Among authors: malmstrom rr. Microbiome. 2020 Feb 15;8(1):21. doi: 10.1186/s40168-020-0790-7. Microbiome. 2020. PMID: 32061258 Free PMC article.
Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution.
Bowers RM, Nayfach S, Schulz F, Jungbluth SP, Ruhl IA, Sheremet A, Lee J, Goudeau D, Eloe-Fadrosh EA, Stepanauskas R, Malmstrom RR, Kyrpides NC, Dunfield PF, Woyke T. Bowers RM, et al. Among authors: malmstrom rr. ISME J. 2022 May;16(5):1337-1347. doi: 10.1038/s41396-021-01178-4. Epub 2021 Dec 30. ISME J. 2022. PMID: 34969995 Free PMC article.
66 results