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Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia.
Brann DH, Tsukahara T, Weinreb C, Lipovsek M, Van den Berge K, Gong B, Chance R, Macaulay IC, Chou HJ, Fletcher RB, Das D, Street K, de Bezieux HR, Choi YG, Risso D, Dudoit S, Purdom E, Mill J, Hachem RA, Matsunami H, Logan DW, Goldstein BJ, Grubb MS, Ngai J, Datta SR. Brann DH, et al. Among authors: street k. Sci Adv. 2020 Jul 31;6(31):eabc5801. doi: 10.1126/sciadv.abc5801. Epub 2020 Jul 24. Sci Adv. 2020. PMID: 32937591 Free PMC article.
Improving replicability in single-cell RNA-Seq cell type discovery with Dune.
Roux de Bézieux H, Street K, Fischer S, Van den Berge K, Chance R, Risso D, Gillis J, Ngai J, Purdom E, Dudoit S. Roux de Bézieux H, et al. Among authors: street k. BMC Bioinformatics. 2024 May 24;25(1):198. doi: 10.1186/s12859-024-05814-6. BMC Bioinformatics. 2024. PMID: 38789920 Free PMC article.
Trajectory inference across multiple conditions with condiments.
Roux de Bézieux H, Van den Berge K, Street K, Dudoit S. Roux de Bézieux H, et al. Among authors: street k. Nat Commun. 2024 Jan 27;15(1):833. doi: 10.1038/s41467-024-44823-0. Nat Commun. 2024. PMID: 38280860 Free PMC article.
Progressive immune dysfunction with advancing disease stage in renal cell carcinoma.
Braun DA, Street K, Burke KP, Cookmeyer DL, Denize T, Pedersen CB, Gohil SH, Schindler N, Pomerance L, Hirsch L, Bakouny Z, Hou Y, Forman J, Huang T, Li S, Cui A, Keskin DB, Steinharter J, Bouchard G, Sun M, Pimenta EM, Xu W, Mahoney KM, McGregor BA, Hirsch MS, Chang SL, Livak KJ, McDermott DF, Shukla SA, Olsen LR, Signoretti S, Sharpe AH, Irizarry RA, Choueiri TK, Wu CJ. Braun DA, et al. Among authors: street k. Cancer Cell. 2021 May 10;39(5):632-648.e8. doi: 10.1016/j.ccell.2021.02.013. Epub 2021 Mar 11. Cancer Cell. 2021. PMID: 33711273 Free PMC article.
75 results