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The era of panomics-driven gene discovery in plants.
Mishra S, Srivastava AK, Khan AW, Tran LP, Nguyen HT. Mishra S, et al. Among authors: khan aw. Trends Plant Sci. 2024 Apr 23:S1360-1385(24)00063-3. doi: 10.1016/j.tplants.2024.03.007. Online ahead of print. Trends Plant Sci. 2024. PMID: 38658292 Review.
Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits.
Varshney RK, Thudi M, Roorkiwal M, He W, Upadhyaya HD, Yang W, Bajaj P, Cubry P, Rathore A, Jian J, Doddamani D, Khan AW, Garg V, Chitikineni A, Xu D, Gaur PM, Singh NP, Chaturvedi SK, Nadigatla GVPR, Krishnamurthy L, Dixit GP, Fikre A, Kimurto PK, Sreeman SM, Bharadwaj C, Tripathi S, Wang J, Lee SH, Edwards D, Polavarapu KKB, Penmetsa RV, Crossa J, Nguyen HT, Siddique KHM, Colmer TD, Sutton T, von Wettberg E, Vigouroux Y, Xu X, Liu X. Varshney RK, et al. Among authors: khan aw. Nat Genet. 2019 May;51(5):857-864. doi: 10.1038/s41588-019-0401-3. Epub 2019 Apr 29. Nat Genet. 2019. PMID: 31036963
Trait associations in the pangenome of pigeon pea (Cajanus cajan).
Zhao J, Bayer PE, Ruperao P, Saxena RK, Khan AW, Golicz AA, Nguyen HT, Batley J, Edwards D, Varshney RK. Zhao J, et al. Among authors: khan aw. Plant Biotechnol J. 2020 Sep;18(9):1946-1954. doi: 10.1111/pbi.13354. Epub 2020 Mar 12. Plant Biotechnol J. 2020. PMID: 32020732 Free PMC article.
A chickpea genetic variation map based on the sequencing of 3,366 genomes.
Varshney RK, Roorkiwal M, Sun S, Bajaj P, Chitikineni A, Thudi M, Singh NP, Du X, Upadhyaya HD, Khan AW, Wang Y, Garg V, Fan G, Cowling WA, Crossa J, Gentzbittel L, Voss-Fels KP, Valluri VK, Sinha P, Singh VK, Ben C, Rathore A, Punna R, Singh MK, Tar'an B, Bharadwaj C, Yasin M, Pithia MS, Singh S, Soren KR, Kudapa H, Jarquín D, Cubry P, Hickey LT, Dixit GP, Thuillet AC, Hamwieh A, Kumar S, Deokar AA, Chaturvedi SK, Francis A, Howard R, Chattopadhyay D, Edwards D, Lyons E, Vigouroux Y, Hayes BJ, von Wettberg E, Datta SK, Yang H, Nguyen HT, Wang J, Siddique KHM, Mohapatra T, Bennetzen JL, Xu X, Liu X. Varshney RK, et al. Among authors: khan aw. Nature. 2021 Nov;599(7886):622-627. doi: 10.1038/s41586-021-04066-1. Epub 2021 Nov 10. Nature. 2021. PMID: 34759320 Free PMC article.
Author Correction: A chickpea genetic variation map based on the sequencing of 3,366 genomes.
Varshney RK, Roorkiwal M, Sun S, Bajaj P, Chitikineni A, Thudi M, Singh NP, Du X, Upadhyaya HD, Khan AW, Wang Y, Garg V, Fan G, Cowling WA, Crossa J, Gentzbittel L, Voss-Fels KP, Valluri VK, Sinha P, Singh VK, Ben C, Rathore A, Punna R, Singh MK, Tar'an B, Bharadwaj C, Yasin M, Pithia MS, Singh S, Soren KR, Kudapa H, Jarquín D, Cubry P, Hickey LT, Dixit GP, Thuillet AC, Hamwieh A, Kumar S, Deokar AA, Chaturvedi SK, Francis A, Howard R, Chattopadhyay D, Edwards D, Lyons E, Vigouroux Y, Hayes BJ, von Wettberg E, Datta SK, Yang H, Nguyen HT, Wang J, Siddique KHM, Mohapatra T, Bennetzen JL, Xu X, Liu X. Varshney RK, et al. Among authors: khan aw. Nature. 2022 Apr;604(7905):E12. doi: 10.1038/s41586-022-04660-x. Nature. 2022. PMID: 35338354 Free PMC article. No abstract available.
Chromosome-length genome assemblies of six legume species provide insights into genome organization, evolution, and agronomic traits for crop improvement.
Garg V, Dudchenko O, Wang J, Khan AW, Gupta S, Kaur P, Han K, Saxena RK, Kale SM, Pham M, Yu J, Chitikineni A, Zhang Z, Fan G, Lui C, Valluri V, Meng F, Bhandari A, Liu X, Yang T, Chen H, Valliyodan B, Roorkiwal M, Shi C, Yang HB, Durand NC, Pandey MK, Li G, Barmukh R, Wang X, Chen X, Lam HM, Jiang H, Zong X, Liang X, Liu X, Liao B, Guo B, Jackson S, Nguyen HT, Zhuang W, Shubo W, Wang X, Aiden EL, Bennetzen JL, Varshney RK. Garg V, et al. Among authors: khan aw. J Adv Res. 2022 Dec;42:315-329. doi: 10.1016/j.jare.2021.10.009. Epub 2021 Nov 3. J Adv Res. 2022. PMID: 36513421 Free PMC article.
Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea.
Khan AW, Garg V, Sun S, Gupta S, Dudchenko O, Roorkiwal M, Chitikineni A, Bayer PE, Shi C, Upadhyaya HD, Bohra A, Bharadwaj C, Mir RR, Baruch K, Yang B, Coyne CJ, Bansal KC, Nguyen HT, Ronen G, Aiden EL, Veneklaas E, Siddique KHM, Liu X, Edwards D, Varshney RK. Khan AW, et al. Nat Genet. 2024 May 23. doi: 10.1038/s41588-024-01760-4. Online ahead of print. Nat Genet. 2024. PMID: 38783120
Author Correction: Cicer super-pangenome provides insights into species evolution and agronomic trait loci for crop improvement in chickpea.
Khan AW, Garg V, Sun S, Gupta S, Dudchenko O, Roorkiwal M, Chitikineni A, Bayer PE, Shi C, Upadhyaya HD, Bohra A, Bharadwaj C, Mir RR, Baruch K, Yang B, Coyne CJ, Bansal KC, Nguyen HT, Ronen G, Aiden EL, Veneklaas E, Siddique KHM, Liu X, Edwards D, Varshney RK. Khan AW, et al. Nat Genet. 2024 May 29. doi: 10.1038/s41588-024-01813-8. Online ahead of print. Nat Genet. 2024. PMID: 38811845 No abstract available.
262 results