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Regulation by transcription factors in bacteria: beyond description.
Balleza E, López-Bojorquez LN, Martínez-Antonio A, Resendis-Antonio O, Lozada-Chávez I, Balderas-Martínez YI, Encarnación S, Collado-Vides J. Balleza E, et al. FEMS Microbiol Rev. 2009 Jan;33(1):133-51. doi: 10.1111/j.1574-6976.2008.00145.x. FEMS Microbiol Rev. 2009. PMID: 19076632 Free PMC article. Review.
Bioinformatics resources for the study of gene regulation in bacteria.
Collado-Vides J, Salgado H, Morett E, Gama-Castro S, Jiménez-Jacinto V, Martínez-Flores I, Medina-Rivera A, Muñiz-Rascado L, Peralta-Gil M, Santos-Zavaleta A. Collado-Vides J, et al. J Bacteriol. 2009 Jan;191(1):23-31. doi: 10.1128/JB.01017-08. Epub 2008 Oct 31. J Bacteriol. 2009. PMID: 18978060 Free PMC article. Review. No abstract available.
Extracting regulatory networks of Escherichia coli from RegulonDB.
Salgado H, Martínez-Flores I, López-Fuentes A, García-Sotelo JS, Porrón-Sotelo L, Solano H, Muñiz-Rascado L, Collado-Vides J. Salgado H, et al. Methods Mol Biol. 2012;804:179-95. doi: 10.1007/978-1-61779-361-5_10. Methods Mol Biol. 2012. PMID: 22144154