R01 GM080742-01A2/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2007	1
2008	4
2009	2
2010	1
2011	4
2024	0

1

Chen Y, Ding F, Nie H, Serohijos AW, Sharma S, Wilcox KC, Yin S, Dokholyan NV. Chen Y, et al. Arch Biochem Biophys. 2008 Jan 1;469(1):4-19. doi: 10.1016/j.abb.2007.05.014. Epub 2007 Jun 8. Arch Biochem Biophys. 2008. PMID: 17585870 Free PMC article.

2

Ab initio folding of proteins with all-atom discrete molecular dynamics.

Ding F, Tsao D, Nie H, Dokholyan NV. Ding F, et al. Structure. 2008 Jul;16(7):1010-8. doi: 10.1016/j.str.2008.03.013. Structure. 2008. PMID: 18611374 Free PMC article.

3

iFoldRNA: three-dimensional RNA structure prediction and folding.

Sharma S, Ding F, Dokholyan NV. Sharma S, et al. Bioinformatics. 2008 Sep 1;24(17):1951-2. doi: 10.1093/bioinformatics/btn328. Epub 2008 Jun 25. Bioinformatics. 2008. PMID: 18579566 Free PMC article.

4

MedusaScore: an accurate force field-based scoring function for virtual drug screening.

Yin S, Biedermannova L, Vondrasek J, Dokholyan NV. Yin S, et al. J Chem Inf Model. 2008 Aug;48(8):1656-62. doi: 10.1021/ci8001167. Epub 2008 Aug 2. J Chem Inf Model. 2008. PMID: 18672869 Free PMC article.

5

Light regulation of protein dimerization and kinase activity in living cells using photocaged rapamycin and engineered FKBP.

Karginov AV, Zou Y, Shirvanyants D, Kota P, Dokholyan NV, Young DD, Hahn KM, Deiters A. Karginov AV, et al. J Am Chem Soc. 2011 Jan 26;133(3):420-3. doi: 10.1021/ja109630v. Epub 2010 Dec 16. J Am Chem Soc. 2011. PMID: 21162531 Free PMC article.

6

Structural and thermodynamic effects of post-translational modifications in mutant and wild type Cu, Zn superoxide dismutase.

Proctor EA, Ding F, Dokholyan NV. Proctor EA, et al. J Mol Biol. 2011 May 6;408(3):555-67. doi: 10.1016/j.jmb.2011.03.004. Epub 2011 Mar 23. J Mol Biol. 2011. PMID: 21396374 Free PMC article.

7

Native-like RNA tertiary structures using a sequence-encoded cleavage agent and refinement by discrete molecular dynamics.

Gherghe CM, Leonard CW, Ding F, Dokholyan NV, Weeks KM. Gherghe CM, et al. J Am Chem Soc. 2009 Feb 25;131(7):2541-6. doi: 10.1021/ja805460e. J Am Chem Soc. 2009. PMID: 19193004 Free PMC article.

8

Glutathionylation at Cys-111 induces dissociation of wild type and FALS mutant SOD1 dimers.

Redler RL, Wilcox KC, Proctor EA, Fee L, Caplow M, Dokholyan NV. Redler RL, et al. Biochemistry. 2011 Aug 16;50(32):7057-66. doi: 10.1021/bi200614y. Epub 2011 Jul 18. Biochemistry. 2011. PMID: 21739997 Free PMC article.

9

Multiscale approaches for studying energy transduction in dynein.

Serohijos AW, Tsygankov D, Liu S, Elston TC, Dokholyan NV. Serohijos AW, et al. Phys Chem Chem Phys. 2009 Jun 28;11(24):4840-50. doi: 10.1039/b902028d. Epub 2009 May 15. Phys Chem Chem Phys. 2009. PMID: 19506759 Free PMC article. Review.

10

Regioselectivity of Catechol O-Methyltransferase Confers Enhancement of Catalytic Activity.

Tsao D, Liu S, Dokholyan NV. Tsao D, et al. Chem Phys Lett. 2011 Apr 20;506(4-6):135-138. doi: 10.1016/j.cplett.2011.03.048. Chem Phys Lett. 2011. PMID: 21731105 Free PMC article.

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